Bioconductor Gdc

Showing : gdc • reset

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3.2k

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tcgabiolinks gdc

7.5 years ago jshelton • 0

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2.1k

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GDC TCGA tcgabiolinks

updated 2.0 years ago by cute scientist • 0 • written 5.4 years ago by Antonio Ahn ▴ 10

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3.1k

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gdc tcga wes gdc data

updated 6.0 years ago by Sean Davis 21k • written 6.0 years ago by Biologist ▴ 110

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1.6k

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R gdc rna-seq dna methylation

updated 5.5 years ago by Sean Davis 21k • written 5.5 years ago by RichardJActon ▴ 50

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1.1k

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genomicdatacommons tcga gdc rest http

updated 5.3 years ago by Sean Davis 21k • written 5.3 years ago by mk ▴ 20

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3.7k

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tcgabiolinks tcga tcgadownload gdcprepare gdc

updated 7.1 years ago by Tiago Chedraoui Silva ▴ 260 • written 7.3 years ago by enigmargs • 0

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1.3k

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TCGA MAF GDC snp mutations

updated 5.0 years ago by Sean Davis 21k • written 5.0 years ago by mario.zanfardino ▴ 160

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504

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TCGA GenomicDataCommons GDC

written 10 months ago by António Miguel de Jesus Domingues ▴ 510

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1.2k

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TCGAbiolinks TCGA GDC

4.4 years ago modarzi ▴ 10

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715

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TCGAbiolinks GDC TCGA

4.4 years ago modarzi ▴ 10

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982

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tcgabiolinks filtering gdc TCGABiolinks rnaseq

4.3 years ago jam526 • 0

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3.0k

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tcgabiolinks tcga-brca gdc pam50 rna-seq

6.1 years ago pfrancislyon • 0

12 results • Page 1 of 1

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Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Answer: DESeq2 v1.35.0 by James W. MacDonald 65k

Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

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Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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Popular Question to gene_bioconductor ▴ 10

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