Biostar Gene set enrichment

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limma camera gene set analysis gene set enrichment

updated 6.1 years ago by Gordon Smyth 47k • written 6.1 years ago by natalia.pietrosemoli • 0

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limma goana gene set enrichment

5.3 years ago emy_66 • 0

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1.6k

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rna-seq bioinformatics gene ontology gene set enrichment go

updated 6.5 years ago by Guangchuang Yu ★ 1.2k • written 6.5 years ago by fromhj304 ▴ 10

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1.4k

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limma edger barcodeplot gene set enrichment mroast

updated 5.2 years ago by Gordon Smyth 47k • written 5.2 years ago by srmaruyama • 0

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783

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gene set analysis gene set enrichment limma

updated 4.5 years ago by Gordon Smyth 47k • written 4.5 years ago by jaynishshah • 0

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924

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camera limma gene set analysis gene set enrichment

updated 4.4 years ago by Gordon Smyth 47k • written 4.4 years ago by emeline.perthame • 0

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1.9k

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topgo gene ontology gene set enrichment rna-seq bioinformatics

updated 6.2 years ago by Lluís Revilla Sancho ▴ 710 • written 6.5 years ago by fromhj304 ▴ 10

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2.6k

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DOSE clusterprofiler annotation gene ontology gene set enrichment

updated 5.3 years ago by Guangchuang Yu ★ 1.2k • written 5.3 years ago by kirannbishwa01 • 0

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718

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gene set enrichment KEGG

updated 5.1 years ago by Lluís Revilla Sancho ▴ 710 • written 5.1 years ago by RMRG ▴ 10

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816

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gsva plage differential expression gene set enrichment

4.2 years ago krassowski.michal ▴ 20

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1000

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gene ontology go analysis gene set enrichment gene set analysis News

updated 5.6 years ago by Martin Morgan 25k • written 5.6 years ago by ivozeller • 0

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Comment: Can I run DESeq2 with SMART-Seq data by ATpoint ★ 2.4k

The choice of preprocessing is on you. There are a variety of benchmark papers and preprints you can get guidance from. Towards prefilteri…

Comment: minfi support of illumina Infinium methylationEPIC v2.0 by mariagallardo • 0

setting the right array type and annotation will do the work: rgsetext@annotation <- c(array = "IlluminaHumanMethylationEPICv2", annot…

Comment: minfi support of illumina Infinium methylationEPIC v2.0 by mariagallardo • 0

Thank you James for providing the annotation and manifest packages for methylationEPIC v2.0. I have installed and loaded them, also I have…

Comment: Does it make sense to have so many statistically significant gene differentially by Sep • 0

Thank you for your reply. I did the same, and I wanted to ask if the following plot make sense or I did sth wrong? The plot is for the gen…

Answer: How to change the dot size in plotPCA? by hediatnani • 0

plotPCA(rld, intgroup = "Tissue") + geom_point(size=1)

Votes

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: Scaling DEXSeq estimateDispersions for large datasets, glmGamPoi?

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Are polynomial contrasts for a time factor possible in DESeq2?

Are polynomial contrasts for a time factor possible in DESeq2?

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