Bioconductor Geneanswers

Showing : geneanswers • reset

votes

replies

829

views

geneanswers

updated 7.3 years ago by Gordon Smyth 50k • written 7.3 years ago by emiliomastriani • 0

vote

replies

1.8k

views

geneanswers metagenome kegg

updated 7.8 years ago by Guangchuang Yu ★ 1.2k • written 9.4 years ago by francesca.defilippis ▴ 100

votes

replies

1.4k

views

GeneAnswers annotation Arabidopsis GO

8.9 years ago lhuang7 ▴ 50

votes

replies

1.1k

views

goProfiles GeneAnswers goProfiles GeneAnswers

updated 11.2 years ago by Marc Carlson ★ 7.2k • written 11.2 years ago by Jose M Garcia Manteiga ▴ 310

votes

replies

947

views

Network GeneAnswers Network GeneAnswers

11.4 years ago Enrico Ferrero ▴ 10

votes

replies

952

views

Annotation GO oligo GeneAnswers Annotation GO oligo GeneAnswers

11.5 years ago Ingrid Mercier ▴ 60

votes

replies

903

views

GO GeneAnswers GO GeneAnswers

12.0 years ago Zhi Zhang ▴ 70

votes

replies

850

views

GO GeneAnswers GO GeneAnswers

12.5 years ago Guest User ★ 13k

votes

replies

1.2k

views

GO GeneAnswers GO GeneAnswers

updated 12.6 years ago by James W. MacDonald 65k • written 12.6 years ago by Ou, Jianhong ★ 1.3k

votes

replies

1.2k

views

Pathways graph Rredland GeneAnswers Pathways graph Rredland GeneAnswers

13.2 years ago laurent jacob ▴ 100

votes

1.3k

views

Rgraphviz GeneAnswers Rgraphviz GeneAnswers

updated 13.3 years ago by Manca Marco PATH ▴ 340 • written 13.3 years ago by john herbert ▴ 10

11 results • Page 1 of 1

Recent ...

Replies

Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Votes

Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Awards • All

Popular Question to James W. MacDonald 65k