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getSeq
•
reset
1
vote
3
replies
2.2k
views
Does there exists a getSeq like function for ranges that wrap around end to start ?
circulargenome
ORFik
getSeq
3.9 years ago
hauken_heyken
▴ 80
0
votes
1
reply
914
views
Error Message in signeR
signeR
getseq
updated 5.8 years ago by
renan.valieris
▴ 10 • written 5.8 years ago by
TRASA
• 0
4
votes
1
reply
1.9k
views
Getting "negative length vectors are not allowed" error in BSgenome::getSeq
BSgenome
getSeq
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
rubi
▴ 110
1
vote
2
replies
1.6k
views
Error in BSGenome "getSeq" function
R
bsgenome
getseq
updated 8.1 years ago by
James W. MacDonald
68k • written 8.1 years ago by
pm16057
• 0
3
votes
1
reply
5.9k
views
extract subsequence(s) from DNAStringSet with getSeq
dnastringset
getseq
updated 8.6 years ago by
Hervé Pagès
16k • written 8.6 years ago by
TimothéeFlutre
▴ 80
1
vote
3
replies
1.6k
views
NAs values when importing BED file using import function
rtracklayer
NA
BED
getseq
9.3 years ago
Dimitris Polychronopoulos
▴ 80
0
votes
2
replies
2.4k
views
BSGenome::getSeq gives error: Error in NSBS(i, x, exact = exact, upperBoundIsStrict = !allow.append)
bsgenome
getseq
updated 9.3 years ago by
Martin Morgan
25k • written 9.3 years ago by
dborgesrmit
• 0
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Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
It seems likely this was installed as an admin account and a user account would not be able to update. Someone with admin access should run…
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
by
James W. MacDonald
68k
Any query over the internet can vary in the time to completion due to the vagaries of the connection you may have. I just tried your query …
Answer: batch effect removal for agilent microarray data
by
James W. MacDonald
68k
If all of the samples in group 155 are one type, and all the other samples in 438 are the other, then no. The biological and technical vari…
Answer: Automatically install dependencies
by
shepherl
4.1k
Since `BiocManager::install` is a wrapper around `install.packages` you should be able to use the dependencies argument. Default is the de…
Comment: For some reason I can't update BiocManager to 3.20
by
azm.ana2
• 0
Sorry i apologize for the delay. Thank you very much for the answer. I have two supervisers and the one who knows about the computer is com…
Votes
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
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