Biostar Go enrichment

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2.9k

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deseq2 goseq rnaseq go enrichment differential gene expression

updated 5.1 years ago by Michael Love 39k • written 5.1 years ago by josef.oeckl • 0

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2.6k

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clusterProfiler GO GO enrichment genesetenrichment

updated 9 months ago by pengmin.wang.1 • 0 • written 5.3 years ago by Huang, Lei [BSD] - CRI ▴ 20

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1.7k

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bacteria GO enrichment

updated 7.6 years ago by Marc Carlson ★ 7.2k • written 7.7 years ago by ksw ▴ 20

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1.5k

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org.dm.eg.db gene ontology go enrichment annotation NOT

updated 6.0 years ago by Valerie Obenchain ★ 6.7k • written 6.0 years ago by ivozeller • 0

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1.5k

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clusterprofiler go enrichment functional enrichment

updated 4.4 years ago by Guangchuang Yu ★ 1.2k • written 4.4 years ago by Jack • 0

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1.4k

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go enrichment gene ontology goseq go

3.5 years ago Raito92 ▴ 60

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1.2k

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rnaseq topgo go enrichment

updated 4.3 years ago by James W. MacDonald 62k • written 4.3 years ago by jgg • 0

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1.0k

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chipseq go enrichment clusterprofiler

updated 5.0 years ago by Guangchuang Yu ★ 1.2k • written 5.0 years ago by Javier Pérez Florido ▴ 840

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871

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topgo ks score kolmogorov-smirnov test go enrichment

updated 4.7 years ago by Lluís Revilla Sancho ▴ 710 • written 4.7 years ago by eagomezc • 0

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813

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go enrichment topgo d.ananassae

updated 6.7 years ago by James W. MacDonald 62k • written 6.7 years ago by koeniger ▴ 10

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705

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gosemsim go enrichment go semantic similarity

4.3 years ago nooshin ▴ 300

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629

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goseq go enrichment

4.8 years ago mart1139 • 0

12 results • Page 1 of 1

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Comment: Scaling and normalization by deconvolution of SMART-Seq 2 data by Assa Yeroslaviz ★ 1.5k

no. each sample is one single embryo in this case (so, two cells). I have mapped them with STARsolo from SMART-seq samples. This is the fir…

Comment: Scaling and normalization by deconvolution of SMART-Seq 2 data by ATpoint ★ 2.5k

Do I read this correctly that you have about 15k cells detected in almost all of these samples? If so then then I would simply run the defa…

Comment: how can I do gene differential analysis on data after vst by linouhao ▴ 20

Can you provide your professional answers now? Let the author of the package evaluate them

Comment: Help with Error in DiffBind by Rory Stark ★ 4.7k

There's a function in `DiffBind` called `dba.plotProfile()` that generates these plots. However the annotations on the right hand side, sho…

Comment: how can I do gene differential analysis on data after vst by linouhao ▴ 20

Thanks a lot. so what is your answer, and wait for the author to judge it is right ot not. I have already read it, If the sequencing dept…

Votes

A: How to deal with Affymetrix GeneChip probeids that map to multiple genes

Comment: Failed to install Biobase

Analyzing RNA-seq data by WGCNA

A: Analyzing RNA-seq data by WGCNA

Comment: Help with Error in DiffBind

Awards • All

Popular Question to Assa Yeroslaviz ★ 1.5k

Supporter to linouhao ▴ 20