Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
gseGO
•
reset
2
votes
2
replies
4.3k
views
How can I visualize Gene Set Enrichment Results from gseGo fun. (clusterProfiler)?
ggplot2
clusterprofiler
visualization
gseGo
7.1 years ago • updated 3.5 years ago
tcalvo
▴ 90
4
votes
15
replies
3.9k
views
All genes in a set for gseGO funtion
gseGO
setSize
updated 19 months ago by
James W. MacDonald
65k • written 19 months ago by
Adelyn
▴ 10
0
votes
1
reply
2.2k
views
clusterProlifer: plotGOgraph() error with gseGO() result
clusterprofiler
gseGO
plotGOgraph()
topGO
updated 7.2 years ago by
Guangchuang Yu
★ 1.2k • written 7.2 years ago by
cjsifuen
• 0
0
votes
1
reply
1.3k
views
Remove highly similar terms from a GO gene set enrichment analysis
clusterProfiler
gseGO
gene ontology
go semantic similarity
gene set enrichment analysis
5.9 years ago
jan.soderman
• 0
0
votes
1
reply
990
views
How to change the siez of lables in heatmap
software error
go
dose
heatplot
gseGo
5.3 years ago
aboumarshal
• 0
0
votes
1
reply
808
views
How to Load a Molecular Signature Database into clusterProfiler gseGO?
gseGO
GeneSet
clusterProfiler
GeneSetEnrichment
updated 9 months ago by
James W. MacDonald
65k • written 9 months ago by
manuelsokolov
• 0
2
votes
1
reply
212
views
Only positive enrichment score in GSEA
clusterProfiler
annotation
gseGO
gsea
OrgDb
updated 6 weeks ago by
Guido Hooiveld
★ 3.9k • written 6 weeks ago by
enee
▴ 10
7 results • Page
1 of 1
Recent ...
Replies
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Intent to delete when going home. Sorry for that!
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
Please ask you own question. Inserting your own dataset into someone else's question like this is very impolite. I have already answered m…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Thanks Gordon for the advice!
Votes
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
Awards
• All
Scholar
to
ATpoint
★ 4.1k
Popular Question
to
Ben
▴ 50
Popular Question
to
Sam
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
▴ 10
Locations
• All
United States,
1 minute ago
Melbourne, Australia,
17 minutes ago
France,
18 minutes ago
United States,
33 minutes ago
European Union,
44 minutes ago
Traffic: 505 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6