Bioconductor Karyoploter

Showing : karyoploter • reset

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645

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TxDb.Mmusculus.UCSC.mm10.ensGene TxDb karyoploteR

11 months ago remi-xavier.coux ▴ 10

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900

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GenomicFeatures karyoploteR TxDb.Hsapiens.UCSC.hg19.knownGene

2.6 years ago Shreyash ▴ 10

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2.4k

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BSgenome.Athaliana.TAIR.TAIR10. karyoploteR BSgenome

updated 3.1 years ago by James W. MacDonald 68k • written 3.2 years ago by rtt100 • 0

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1.2k

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KaryoploteR

updated 5.2 years ago by Kevin Blighe ★ 4.0k • written 5.2 years ago by mpigozzi • 0

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4.2k

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karyoploter

updated 6.2 years ago by bernatgel ▴ 150 • written 6.2 years ago by Aditya ▴ 160

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1.6k

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karyoploteR

updated 6.6 years ago by bernatgel ▴ 150 • written 6.6 years ago by saeed Ur Rehman • 0

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2.4k

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software error R bsgenome karyoploter

updated 8.0 years ago by bernatgel ▴ 150 • written 8.1 years ago by kirannbishwa01 ▴ 20

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1.7k

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karyoploter

updated 8.2 years ago by bgel ▴ 10 • written 8.2 years ago by spr ▴ 10

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1.2k

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KaryoploteR

8.4 years ago Radek ▴ 90

9 results • Page 1 of 1

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Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k

Hello Rui Tang, The buffer overflow error in featureCounts that you encountered is likely due to a compatibility issue between the Subre…

Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k

The issue that you describe with the tumor mutational burden (TMB) plots appearing linear and lacking consistent TMB values across samples …

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Kevin Blighe ★ 4.0k

There are alternative explanations for why these samples are so similar. The similarity could result from low biological variability in gen…

Comment: Post translational modifications and phosphoproteomics in limpa? by james.eapen • 0

Thank you!

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by ATpoint ★ 5.0k

The donor effect is crystal clear, and absent in these suspicious samples. It strongly argues for a technical problem. If you really need s…

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Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction

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Scholar to Gordon Smyth 53k