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karyoploter
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txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome
TxDb.Mmusculus.UCSC.mm10.ensGene
TxDb
karyoploteR
10 months ago
remi-xavier.coux
▴ 10
1
vote
0
replies
872
views
Make custom Txdb class objects from Txdb
GenomicFeatures
karyoploteR
TxDb.Hsapiens.UCSC.hg19.knownGene
2.5 years ago
Shreyash
▴ 10
9
votes
5
replies
2.3k
views
karyoploteR genome coverage plotting using BSgenome.TAIR10
BSgenome.Athaliana.TAIR.TAIR10.
karyoploteR
BSgenome
updated 3.0 years ago by
James W. MacDonald
68k • written 3.0 years ago by
rtt100
• 0
0
votes
1
reply
1.2k
views
KaryoploteR: error using galGal6 genome
KaryoploteR
updated 5.1 years ago by
Kevin Blighe
★ 4.0k • written 5.1 years ago by
mpigozzi
• 0
4
votes
5
replies
4.1k
views
How to add a color legend to plotKaryotype and kpPlotRegions ?
karyoploter
updated 6.1 years ago by
bernatgel
▴ 150 • written 6.1 years ago by
Aditya
▴ 160
0
votes
1
reply
1.5k
views
Bioconductor - Karyoploter | Visualization | Multiple Chromosome display issue
karyoploteR
updated 6.5 years ago by
bernatgel
▴ 150 • written 6.5 years ago by
saeed Ur Rehman
• 0
0
votes
1
reply
2.3k
views
How to name the custom genome in karyoploteR ?
software error
R
bsgenome
karyoploter
updated 7.9 years ago by
bernatgel
▴ 150 • written 7.9 years ago by
kirannbishwa01
▴ 20
1
vote
2
replies
1.7k
views
KaryoploteR does not work on R.3.3.3
karyoploter
updated 8.0 years ago by
bgel
▴ 10 • written 8.0 years ago by
spr
▴ 10
0
votes
0
replies
1.2k
views
karyoploteR: custom genome axis $latest.plot
KaryoploteR
8.2 years ago
Radek
▴ 90
9 results • Page
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Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
by
ATpoint
★ 4.9k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
ATpoint
★ 4.9k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Comment: R course in Boston December 19-20
by
eja.gaasa2e.r.m
• 0
The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…
Answer: Gatins Set error
by
James W. MacDonald
68k
`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.
Answer: How to model DE for RNA-seq in concordant monozygotic twins?
by
Gordon Smyth
53k
Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…
Votes
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Answer: ordinary t from limma [was: How would I normally compare swirl?]
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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