Bioconductor Karyoploter

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644

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TxDb.Mmusculus.UCSC.mm10.ensGene TxDb karyoploteR

11 months ago remi-xavier.coux ▴ 10

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899

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GenomicFeatures karyoploteR TxDb.Hsapiens.UCSC.hg19.knownGene

2.6 years ago Shreyash ▴ 10

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2.4k

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BSgenome.Athaliana.TAIR.TAIR10. karyoploteR BSgenome

updated 3.1 years ago by James W. MacDonald 68k • written 3.1 years ago by rtt100 • 0

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1.2k

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KaryoploteR

updated 5.2 years ago by Kevin Blighe ★ 4.0k • written 5.2 years ago by mpigozzi • 0

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4.2k

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karyoploter

updated 6.2 years ago by bernatgel ▴ 150 • written 6.2 years ago by Aditya ▴ 160

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1.6k

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karyoploteR

updated 6.6 years ago by bernatgel ▴ 150 • written 6.6 years ago by saeed Ur Rehman • 0

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2.4k

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software error R bsgenome karyoploter

updated 8.0 years ago by bernatgel ▴ 150 • written 8.1 years ago by kirannbishwa01 ▴ 20

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1.7k

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karyoploter

updated 8.2 years ago by bgel ▴ 10 • written 8.2 years ago by spr ▴ 10

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1.2k

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KaryoploteR

8.4 years ago Radek ▴ 90

9 results • Page 1 of 1

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Answer: mzR-Rcpp compiler version issue by Laurent Gatto 1.6k

There are two issues here. First, a warning about mzR, that you can safely ignore. It tells you that mzR was compiled using a different …

Comment: Identifying differentially expressed genes in individual samples from a large co by jamie.gearing ▴ 60

Great. Yes, something descriptive is probably good enough, even if the p-values themselves are not so rigorous. Thanks very much Gordon!

Comment: Co-occurrence Network Analysis between Algae and Bacteria by Stefano Mangiola ▴ 40

Just a placeholder, that we are extending `sccomp` to co-occurrence analyses. Yours could be a good use-case to test first. We will be in t…

Answer: DESeq2 design for haplotype MPRA by aimesd808 • 0

I appreciate you telling me about this. Now it's crystal plain to me. Publish this: https://support.bioconductor.org/p/9162649/

Answer: Extract snp information from genomic regions with biomaRt -> "oaries_snp" by Kevin Blighe ★ 4.0k

My sincere apologies that my colleagues had ignored your question. The error occurs because the "chromosomal_region" filter is not valid…

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Answer: Identifying differentially expressed genes in individual samples from a large co

Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction

Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif

Comment: Error installing Seqinfo

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