Bioconductor Lfcthreshold

Showing : lfcthreshold • reset

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2.5k

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DESeq2 lfcThreshold

3.2 years ago Abir.khazaal ▴ 10

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lfcshrink DESeq2 RNASeq lfcthreshold

3.4 years ago ClaudiaE • 0

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ashr Deseq2 lfcThreshold

updated 4.2 years ago by Michael Love 43k • written 5.6 years ago by Iryna • 0

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deseq2 differential expression logfoldchange lfcshrink lfcthreshold

updated 4.5 years ago by Michael Love 43k • written 7.4 years ago by emi.sch ▴ 50

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deseq2 lfcshrink lfcthreshold differential gene expression

updated 7.0 years ago by Michael Love 43k • written 7.0 years ago by corentinrichard374369 • 0

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DESeq2 lfcThreshold

updated 7.7 years ago by Michael Love 43k • written 7.7 years ago by Mike ▴ 10

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lfcthreshold deseq2

updated 7.9 years ago by Michael Love 43k • written 7.9 years ago by lirongrossmann ▴ 80

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deseq2 microrna lfcThreshold stable expression ffpe

updated 10.1 years ago by Michael Love 43k • written 10.1 years ago by mariakarand ▴ 20

8 results • Page 1 of 1

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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