Bioconductor Lfcthreshold

Showing : lfcthreshold • reset

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2.4k

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DESeq2 lfcThreshold

3.2 years ago Abir.khazaal ▴ 10

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3.0k

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lfcshrink DESeq2 RNASeq lfcthreshold

3.3 years ago ClaudiaE • 0

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3.0k

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ashr Deseq2 lfcThreshold

updated 4.1 years ago by Michael Love 43k • written 5.5 years ago by Iryna • 0

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9.8k

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deseq2 differential expression logfoldchange lfcshrink lfcthreshold

updated 4.4 years ago by Michael Love 43k • written 7.4 years ago by emi.sch ▴ 50

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1.5k

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deseq2 lfcshrink lfcthreshold differential gene expression

updated 7.0 years ago by Michael Love 43k • written 7.0 years ago by corentinrichard374369 • 0

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2.9k

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DESeq2 lfcThreshold

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by Mike ▴ 10

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6.9k

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lfcthreshold deseq2

updated 7.8 years ago by Michael Love 43k • written 7.9 years ago by lirongrossmann ▴ 80

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3.6k

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deseq2 microrna lfcThreshold stable expression ffpe

updated 10.0 years ago by Michael Love 43k • written 10.0 years ago by mariakarand ▴ 20

8 results • Page 1 of 1

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Comment: Save the Date for EuroBioC2026 in Turku! by jamesbennettki • 0

That sounds amazing I have always wanted to visit Finland and meet others in the Bioconductor community Events like EuroBioC2026 inspire me…

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Votes

Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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