Showing : lfcthreshold • reset
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4
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2.4k
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DESeq2 lfcThreshold - all my padj are equal to 1
DESeq2 lfcThreshold
3.2 years ago Abir.khazaal ▴ 10
1
vote
2
replies
3.0k
views
DEseq2 anlysis - LfcThreshold and Lfcshrink options
lfcshrink DESeq2 RNASeq lfcthreshold
3.3 years ago ClaudiaE • 0
0
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5
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3.0k
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Deseq2, lfcThreshold .
ashr Deseq2 lfcThreshold
updated 4.1 years ago by 43k • written 5.5 years ago by • 0
27
votes
17
replies
9.8k
views
DESeq2 1.20.0 lfcshrink function
deseq2 differential expression logfoldchange lfcshrink lfcthreshold
updated 4.4 years ago by 43k • written 7.4 years ago by ▴ 50
0
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1
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1.5k
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DESeq2 - shrunken log fold changes and threshold test
deseq2 lfcshrink lfcthreshold differential gene expression
updated 7.0 years ago by 43k • written 7.0 years ago by • 0
1
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2
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2.9k
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[DESeq2] Results summary indicates LFC > and < 0 even with changed lfcThreshold
DESeq2 lfcThreshold
updated 7.6 years ago by 43k • written 7.6 years ago by ▴ 10
9
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2
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6.9k
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log fold change threshold in Deseq2 - using lfcthreshold
lfcthreshold deseq2
updated 7.9 years ago by 43k • written 7.9 years ago by ▴ 80
2
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1
reply
3.6k
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Setting a good lfcThreshold-value in DESeq2 to find stably expressed microRNAs
deseq2 microrna lfcThreshold stable expression ffpe
updated 10.0 years ago by 43k • written 10.0 years ago by ▴ 20
8 results • Page 1 of 1
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Hi Joseph, I agree with ATpoint's suggestion that pseudobulk aggregation (e.g., via aggregateData in scran or similar) would likely be f…
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