Bioconductor LmFit

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limma illumina450k lmfit

updated 7.5 years ago by Ryan C. Thompson ★ 7.9k • written 7.5 years ago by DSP • 0

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721

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limma lmFit mean expression level

updated 4.1 years ago by James W. MacDonald 65k • written 4.1 years ago by anna • 0

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limma lmFit

updated 9.3 years ago by Gordon Smyth 50k • written 9.9 years ago by Arvid Sondén ▴ 40

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lmFit

3.0 years ago • updated 2.9 years ago AyHi • 0

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limma illumina microarray lmfit differential gene expression

updated 8.7 years ago by James W. MacDonald 65k • written 8.7 years ago by kanacska ▴ 10

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limma lmFit

updated 9.3 years ago by Gordon Smyth 50k • written 13.1 years ago by Peter Davidsen ▴ 210

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limma lmfit model.matrix differential gene expression

6.6 years ago stinehedensted • 0

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limma logfc lmfit

updated 8.9 years ago by Aaron Lun ★ 28k • written 8.9 years ago by Moritz E. Beber ▴ 10

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lmfit

updated 8.4 years ago by Gordon Smyth 50k • written 8.4 years ago by libya.tahani • 0

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limma agilent microarrays lmfit

updated 7.8 years ago by Gordon Smyth 50k • written 7.8 years ago by Jesse L. • 0

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limma contrast missing data lmfit makecontrasts

updated 6.7 years ago by Gordon Smyth 50k • written 6.7 years ago by wewolski ▴ 10

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limma lmfit voom limma design matrix voomwithqualityweights

updated 5.4 years ago by Gordon Smyth 50k • written 5.4 years ago by kediggins ▴ 10

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896

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limma lmfit

updated 5.0 years ago by Aaron Lun ★ 28k • written 5.0 years ago by mouton.alice ▴ 10

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lmFit

updated 23 months ago by Gordon Smyth 50k • written 2.9 years ago by AyHi • 0

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model.matrix lmFit eBayes GEOquery limma

6.2 years ago darthratus • 0

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limma lmfit design matrix r

updated 5.8 years ago by Aaron Lun ★ 28k • written 5.8 years ago by anupriya.dalmia • 0

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limma voom lmfit ebayesfit

updated 4.0 years ago by Gordon Smyth 50k • written 4.0 years ago by sa825 • 0

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903

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limma lmfit R DifferentialExpression

updated 23 months ago by ATpoint ★ 4.1k • written 23 months ago by Dimitris • 0

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limma agilent microarray lmfit model.matrix

updated 7.5 years ago by Gordon Smyth 50k • written 7.5 years ago by Maximilian ▴ 10

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1.2k

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limma lmfit weight individual

7.2 years ago stephane.cauchi ▴ 10

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763

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minfi limma lmm lmfit dmpFinder

2.9 years ago kyleyxw • 0

21 results • Page 1 of 1

Recent ...

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Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k

Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…

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Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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