Biostar Missing data

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961

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Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

3.2 years ago jam526 • 0

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2.2k

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deseq2 sample_table missing data

updated 4.0 years ago by g.wang2 • 0 • written 7.9 years ago by anpham ▴ 40

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766

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deseq2 paired samples missing data multiple treatments

updated 4.2 years ago by Michael Love 39k • written 4.2 years ago by greg.deakin • 0

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1.9k

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limma missing data methylation normalization

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by mheydarpour ▴ 10

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1.8k

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limma contrast missing data lmfit makecontrasts

updated 5.4 years ago by Gordon Smyth 47k • written 5.5 years ago by wewolski ▴ 10

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630

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pcamethods missing data

5.8 years ago eli-sava • 0

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5.9k

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software error rnaseq wgcna missing data

7.2 years ago • updated 6.8 years ago dvillarlozano ▴ 10

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743

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cellhts2 upload missing data

updated 7.0 years ago by Joseph Barry ▴ 160 • written 7.0 years ago by zmorehouse • 0

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808

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missing data filter

updated 7.2 years ago by James W. MacDonald 62k • written 7.2 years ago by rgescudero • 0

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1.2k

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missing data missing value imputation impute MICE bioconductor

7.3 years ago svlachavas ▴ 800

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1.1k

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software error missing data workflowinstall

7.7 years ago anoll2 • 0

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1.0k

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bayseq missing data

7.8 years ago k.w.lau • 0

12 results • Page 1 of 1

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Comment: TCGA: clinical data and expression data by sharifnstu1203002m • 0

Hello, I am in the same problem. I downloaded "transcriptome profiling" data of TCGA by using the Bioconductor package. I get my gene expr…

Comment: How to normalize long-read RNA-seq data for comparison with short-reads by Jonathan Göke ▴ 40

Great to hear that you are using Bambu. Yes, I think that part of your question does not have one correct answer, there are many ways in wh…

Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R by Gordon Smyth 47k

Choosing which samples to normalize together is not dependent on library size but rather on (1) whether the tissue samples are comparable a…

Comment: Atena package - error (new user) by lalanis1 • 0

Thanks a lot, Calvo. Will run my files with revised version soon! Best regards, Lalani

Comment: Nested paired design with covariates in limma by Gordon Smyth 47k

Please post a new question with enough detail to answer your question. If you want bespoke advance, then you need to post the details of yo…

Votes

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R

C: Can't install TopmedPipeline Package

Comment: Question about GWASTools gdsSubset

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Awards • All

Scholar to James W. MacDonald 62k

Teacher to Michael Love 39k