Bioconductor Missing data

Showing : missing data • reset

vote

replies

3.0k

views

Missing Data TCGAbiolinks Kaplan-Meier LIHC Xenabrowser

6.3 years ago • updated 6.2 years ago jam526 • 0

votes

replies

3.7k

views

deseq2 sample_table missing data

updated 7.1 years ago by g.wang2 • 0 • written 10.9 years ago by anpham ▴ 70

votes

2.0k

views

deseq2 paired samples missing data multiple treatments

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by greg.deakin • 0

votes

replies

3.6k

views

limma missing data methylation normalization

updated 8.3 years ago by Aaron Lun ★ 29k • written 8.3 years ago by mheydarpour ▴ 10

votes

replies

3.1k

views

limma contrast missing data lmfit makecontrasts

updated 8.4 years ago by Gordon Smyth 53k • written 8.5 years ago by wewolski ▴ 10

votes

replies

1.2k

views

pcamethods missing data

8.9 years ago eli-sava • 0

votes

replies

9.4k

views

software error rnaseq wgcna missing data

10.2 years ago • updated 9.8 years ago dvillarlozano ▴ 10

votes

1.3k

views

cellhts2 upload missing data

updated 10.0 years ago by Joseph Barry ▴ 160 • written 10.0 years ago by zmorehouse • 0

vote

1.3k

views

missing data filter

updated 10.2 years ago by James W. MacDonald 68k • written 10.2 years ago by rgescudero • 0

votes

replies

1.9k

views

missing data missing value imputation impute MICE bioconductor

10.3 years ago svlachavas ▴ 840

votes

1.8k

views

software error missing data workflowinstall

10.8 years ago anoll2 • 0

votes

replies

1.8k

views

bayseq missing data

10.8 years ago k.w.lau • 0

12 results • Page 1 of 1

Recent ...

Replies

Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0

FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 150

This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…

Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Votes

Answer: Can you colour dendrogram branch clusters in pheatmap?

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Awards • All

Popular Question to Peter Hickey ▴ 760