Bioconductor LncRNA

Showing : lncRNA • reset

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3.3k

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diffGeneAnalysis lncRNA

5 months ago • updated 4 months ago John ▴ 10

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640

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lncRNA probeID mRNA genesymbol

2.8 years ago Sooni ▴ 10

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2.0k

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recount RNAseq gencode lncRNA gene annotation

updated 6.6 years ago by chris.wilks ▴ 70 • written 6.7 years ago by francesco.gandolfi ▴ 20

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GenomicFeatures TPM FPKM lncRNA

7.5 years ago Ina Hoeschele ▴ 620

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4.2k

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lncRNA featureCounts STAR annotation

updated 7.5 years ago by Wei Shi ★ 3.6k • written 7.5 years ago by inah ▴ 10

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1.9k

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microarray lncrna microrna mrna raw data

updated 8.0 years ago by Axel Klenk ★ 1.1k • written 8.0 years ago by ntagaras • 0

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3.8k

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arraystar lncRNA annotation annotationdbi

updated 10.3 years ago by xiangy7 • 0 • written 10.7 years ago by Kevin Coombes ▴ 430

7 results • Page 1 of 1

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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