Showing : lumi • reset
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lumiR Does Not Create lumi Batch
lumi lumi
updated 14.2 years ago by 21k • written 14.2 years ago by ▴ 750
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2
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1.1k
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issue with limma?
limma lumi limma lumi
updated 14.3 years ago by 21k • written 14.3 years ago by ▴ 180
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1.3k
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diagnosing problems with processing microarray data using lumi package
Microarray probe PROcess convert lumi Microarray probe PROcess convert lumi
14.3 years ago Juliet Hannah ▴ 360
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4
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1.5k
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MA plots for large number of arrays
affy affyPLM beadarray lumi affy affyPLM beadarray lumi
updated 14.3 years ago by ▴ 740 • written 14.3 years ago by ▴ 360
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2
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1.6k
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lumi: Methylation450 Data Input
lumi lumi
updated 14.3 years ago by ▴ 580 • written 14.3 years ago by ▴ 40
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2
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2.7k
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unable to install lumi package
lumi BiocInstaller lumi BiocInstaller
updated 14.3 years ago by 68k • written 14.3 years ago by ▴ 360
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812
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Sample Grouping
lumi lumi
14.4 years ago rajasereddy ▴ 10
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2
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1.0k
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About GEO submission of Illumina data
lumi lumi
updated 14.5 years ago by 21k • written 14.5 years ago by ▴ 20
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889
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About GEO submission of Illumina data by lumi
lumi lumi
14.5 years ago Yu Leng Phua ▴ 20
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1
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1.2k
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lumi, Illumina Methylation 450k, and robust methylation calls
lumi lumi
updated 14.6 years ago by ▴ 270 • written 14.6 years ago by ▴ 10
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1.3k
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adding annotation to illumina data
limma convert lumi limma convert lumi
14.6 years ago Kripa R ▴ 180
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2
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1.4k
views
inconsistent CHR mapping- IlluminaHumanMethylation450k.db
Annotation probe convert lumi Annotation probe convert lumi
updated 14.7 years ago by ▴ 30 • written 14.7 years ago by ▴ 10
0
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2
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1.5k
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memory problem
Normalization lumi methylumi Normalization lumi methylumi
updated 14.7 years ago by ▴ 620 • written 14.7 years ago by 21k
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5
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2.0k
views
lumi, Illumina Methylation 450k, and robust methylation calls
lumi lumi
14.7 years ago Pan Du ▴ 440
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1
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1.3k
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lumi, Illumina Methylation 450k, and robust methylation calls
lumi lumi
updated 14.7 years ago by ▴ 620 • written 14.7 years ago by ▴ 270
0
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1
reply
802
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methylated and unmethylated function
lumi lumi
updated 14.7 years ago by ★ 4.2k • written 14.7 years ago by ▴ 30
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3
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1.4k
views
lumi and plotHousekeepingGene
Cancer lumi Cancer lumi
updated 14.7 years ago by ▴ 440 • written 14.8 years ago by ▴ 740
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9
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2.3k
views
Lumi methylation analysis errors in lmFit
Normalization lumi Normalization lumi
updated 14.8 years ago by 21k • written 14.8 years ago by ▴ 100
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1.4k
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Chip version of Illumina HT 12 data [ lumi getChipInfo() method ]
Microarray Normalization Cancer Breast lumi Microarray Normalization Cancer Breast lumi
14.8 years ago Md.Mamunur Rashid ▴ 260
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1.2k
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lumi : Problems with the gammaFitEM() and lumiMethyStatus() functions.in lumi
Microarray Cancer lumi Microarray Cancer lumi
14.8 years ago NAIARA GARCÍA ▴ 10
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980
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lumi on 450K question
Genetics lumi Genetics lumi
14.8 years ago Pan Du ▴ 440
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2
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1.4k
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lumi: estimateMethylationBG problem
Annotation Normalization Cancer probe lumi Annotation Normalization Cancer probe lumi
updated 14.8 years ago by ▴ 620 • written 14.8 years ago by ▴ 440
0
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1
reply
914
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Methylation status using lumi
lumi lumi
updated 14.8 years ago by ★ 4.2k • written 14.8 years ago by ▴ 10
0
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0
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962
views
gammaFitEM()
Microarray lumi Microarray lumi
14.8 years ago Richard C. McEachin ▴ 10
0
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2
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1.4k
views
Reading methylation data using lumi package
lumi lumi
updated 14.9 years ago by 21k • written 14.9 years ago by ▴ 20
0
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5
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2.2k
views
problems installing lumi
lumi lumi
updated 14.9 years ago by ★ 8.2k • written 14.9 years ago by ▴ 620
0
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1
reply
2.1k
views
Modeling of methylation status using lumi
Microarray lumi BRAIN Microarray lumi BRAIN
updated 15.0 years ago by ▴ 80 • written 15.0 years ago by ▴ 620
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1
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1.4k
views
Lumi problem of adding control data
probe lumi probe lumi
updated 15.0 years ago by ▴ 370 • written 15.0 years ago by ▴ 80
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0
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844
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Fwd: Lumi problem of adding control data
probe lumi probe lumi
15.0 years ago Pan Du ▴ 80
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3
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1.5k
views
Lumi problem
probe lumi probe lumi
15.0 years ago mali salmon ▴ 370
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2
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1.7k
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Lumi: LumiT vst transform error
lumi lumi
updated 15.0 years ago by ★ 1.2k • written 15.0 years ago by ▴ 30
0
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0
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1.2k
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Question regarding background correction in lumi package
Microarray lumi Microarray lumi
15.0 years ago Pan Du ★ 1.2k
0
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3
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1.9k
views
Adding Illumina GEO GPL IDs to IlluminaIDMapping?
SystemsBiology lumi SystemsBiology lumi
updated 15.1 years ago by 21k • written 15.1 years ago by ★ 1.2k
0
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1
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2.2k
views
Possible issue with detection p-values in Lumi package
probe limma lumi probe limma lumi
updated 15.2 years ago by ★ 3.6k • written 15.2 years ago by ▴ 20
0
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0
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1.0k
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Merging bioconductor lumi annotations with lumi output
Annotation probe lumi Annotation probe lumi
15.2 years ago Thomas Hampton ▴ 750
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1.1k
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Merging bioconductor lumi annotations with lumi output
Annotation probe lumi Annotation probe lumi
15.2 years ago Pan Du ★ 1.2k
0
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3
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1.3k
views
New Lumi data fails to load via lumiR
Annotation lumi Annotation lumi
updated 15.2 years ago by ▴ 300 • written 15.2 years ago by ▴ 750
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0
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1.3k
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Modeling of methylation status using lumi
Microarray lumi BRAIN Microarray lumi BRAIN
15.2 years ago Pan Du ★ 1.2k
0
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1.2k
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Results of QC of Demodata included in the package, HumMeth27QCReport
Normalization lumi methylumi Normalization lumi methylumi
15.3 years ago Francesco Mancuso ▴ 40
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1.2k
views
Illumina data analysis using lumi
probe lumi probe lumi
15.3 years ago Pan Du ★ 1.2k
0
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3
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1.6k
views
Processing of Illumina Infinium methylation microarray data using lumi - addColorChannelInfo bug?
lumi lumi
updated 15.4 years ago by 21k • written 15.4 years ago by ▴ 140
0
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0
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1.1k
views
Lumi: problems reading a GenomStudio file
GO lumi GO lumi
15.5 years ago Østensen, Ingrid Helen Garmann ▴ 10
0
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0
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1.5k
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about lumi support for Illumina HT-12 v4
Annotation probe annotate lumi Annotation probe annotate lumi
15.7 years ago Pan Du ★ 1.2k
0
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6
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2.1k
views
Illumina data and GO2heatmap
Annotation lumi Annotation lumi
updated 15.7 years ago by ▴ 480 • written 15.7 years ago by ▴ 70
0
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2
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1.5k
views
annotating lumi
Microarray Annotation Normalization probe annotate lumi Microarray Annotation probe lumi
updated 15.8 years ago by ▴ 80 • written 15.8 years ago by ▴ 90
0
votes
2
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1.9k
views
help with lumi
Microarray Annotation Normalization probe lumi Microarray Annotation Normalization probe
updated 15.8 years ago by ★ 1.2k • written 15.8 years ago by ▴ 90
0
votes
2
replies
1.7k
views
help with illumina microarray (DASL)
Microarray Annotation annaffy lumi Microarray Annotation annaffy lumi
updated 15.8 years ago by ★ 1.2k • written 15.8 years ago by ▴ 90
0
votes
2
replies
2.2k
views
lumi annotation using nuID, missing gene symbols
Annotation probe annotate lumi Annotation probe annotate lumi
updated 15.8 years ago by ★ 7.2k • written 15.8 years ago by ▴ 170
0
votes
3
replies
1.5k
views
Memory and vector size management on linux 64bit
Microarray lumi Microarray lumi
updated 15.9 years ago by ★ 4.3k • written 15.9 years ago by ▴ 200
0
votes
2
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1.1k
views
problem with lumiRatAll.db
Annotation Cancer probe annotate lumi Annotation Cancer probe annotate lumi
updated 16.1 years ago by ▴ 300 • written 16.1 years ago by ▴ 20
244 results • Page 3 of 5
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Answer: bcftools norm Equivalent by a2a2hd42aa • 0
it lacks a direct, single function equivalent to bcftools norm for variant normalization. Bioinformaticians often bridge this gap by using …
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
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Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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