updated 8.0 years ago by
arielpaulson
▴
20
•
written 8.1 years ago by
Thomas Maurel
▴
800
4
votes
9
replies
3.0k
views
1
vote
0
replies
1.1k
views
7.8 years ago
Thomas Maurel
▴
800
1
vote
0
replies
786
views
0
votes
0
replies
711
views
0
votes
2
replies
2.0k
views
updated 4.1 years ago by
James W. MacDonald
65k
•
written 4.1 years ago by
didemdkn
•
0
0
votes
1
reply
1.2k
views
updated 3.4 years ago by
Mike Smith
★
6.5k
•
written 3.4 years ago by
anhvo711
•
0
0
votes
4
replies
1.1k
views
updated 5.8 years ago by
James W. MacDonald
65k
•
written 5.8 years ago by
cagenet34
▴
20
0
votes
0
replies
889
views
Recent ...
Replies
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★
4.1k
> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level
edgeR devs published something…
Comment: Differences in differential analysis methods for RNA-Seq
by
james.zhang20
•
0
Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…
Comment: Deseq2 and Normalization of RNA sequencing data
by
ATpoint
★
4.1k
There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★
4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
•
0
Thank for your response. It is Illumina 450 K. I use this code
```{r }
library(IlluminaHumanMethylation450kanno.ilmn12.hg19)
annotat…
Awards
• All
Popular Question to
siajunren
•
0
Scholar to
Rory Stark
★
5.2k
Popular Question to
tangming2005
▴
190
Popular Question to
Ian D.
▴
70
Popular Question to
junhui.li11
•
0
Locations
• All
France, 5 minutes ago
United Kingdom, 14 minutes ago
Germany, 30 minutes ago
WEHI, Melbourne, Australia, 36 minutes ago
UPF, Barcelona, Spain, 51 minutes ago
France, 5 minutes ago
United Kingdom, 14 minutes ago
Germany, 30 minutes ago
WEHI, Melbourne, Australia, 36 minutes ago
UPF, Barcelona, Spain, 51 minutes ago
Traffic: 824 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6