Showing : meme • reset
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Plotting motif enrichment vs background - Jaspar core vertebrates
pwm motifs jaspar meme motif analysis
6.9 years ago rbronste ▴ 60
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2
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1.7k
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Split AME .tsv file into GRanges object or DataFrame
meme ame motif dataframe granges
updated 7.0 years ago by ★ 11k • written 7.0 years ago by ▴ 60
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Trying to load several MEME formatted motifs for use in motifStack
motifstack meme
7.7 years ago aramp10 • 0
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2
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1.6k
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motifStack importMatrix problem reading meme file to pcm
motifstack meme
updated 7.7 years ago by ★ 1.3k • written 7.7 years ago by ▴ 10
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Import motifs in .meme format in MotifDB
motfdb pwmenrich meme
9.7 years ago enricoferrero ▴ 680
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1.7k
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Repetitive motifs on Illumina 450k derived sequences
illumina 450k motifs meme
9.8 years ago Gustavo Fernández Bayón ▴ 440
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4.9k
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Please suggest any good motif Discovery tool in R-Bioconductor.
motif motifdb meme
updated 10.0 years ago by 16k • written 10.0 years ago by ▴ 50
7 results • Page 1 of 1
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Comment: After running samtools, the featureCounts command crashed. by surprised.swordtail.tlfy • 0
Hey Rui, that's a tricky error! Kevin's suggestion about the GTF file makes total sense. I've had similar issues with file paths in WSL cau…
Comment: How to reverse complement some elements of a DNAStringSet by Lenson • 0
Hey, thanks for the insightful post! I totally get what you mean about the learning process. Sometimes you try a new approach and it just d…
Comment: Research and Service Group Leader positions in AI in Biology at EMBL by eja.gssssswssswwse.r.m • 0
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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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