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meme
•
reset
0
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1.1k
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Plotting motif enrichment vs background - Jaspar core vertebrates
pwm
motifs
jaspar
meme
motif analysis
6.8 years ago
rbronste
▴ 60
1
vote
2
replies
1.6k
views
Split AME .tsv file into GRanges object or DataFrame
meme
ame
motif
dataframe
granges
updated 6.9 years ago by
Michael Lawrence
★ 11k • written 6.9 years ago by
rbronste
▴ 60
0
votes
0
replies
998
views
Trying to load several MEME formatted motifs for use in motifStack
motifstack
meme
7.6 years ago
aramp10
• 0
1
vote
2
replies
1.5k
views
motifStack importMatrix problem reading meme file to pcm
motifstack
meme
updated 7.6 years ago by
Ou, Jianhong
★ 1.3k • written 7.6 years ago by
lmolla
▴ 10
0
votes
0
replies
1.6k
views
Import motifs in .meme format in MotifDB
motfdb
pwmenrich
meme
9.5 years ago
enricoferrero
▴ 680
0
votes
0
replies
1.6k
views
Repetitive motifs on Illumina 450k derived sequences
illumina
450k
motifs
meme
9.7 years ago
Gustavo Fernández Bayón
▴ 440
2
votes
1
reply
4.9k
views
Please suggest any good motif Discovery tool in R-Bioconductor.
motif
motifdb
meme
updated 9.9 years ago by
Hervé Pagès
16k • written 9.9 years ago by
vinod.acear
▴ 50
7 results • Page
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Answer: DiffBind - question on the use of filtered or unfiltered input data
by
vejogos850
• 0
DiffBind - question on the use of filtered or unfiltered input data is the best to deal with, and it provides us the solutions that we are …
Answer: Help with defining groups
by
Gordon Smyth
53k
Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…
Comment: Sharing a collection of datasets in ExperimentHub
by
Peter Hickey
▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
by
ReinholdGaylord99
• 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
Gordon Smyth
53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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