Bioconductor Methylation

Showing : methylation • reset

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329

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EPICV1 Methylation combineArrays minifi EPICv2manifest

5 weeks ago • updated 6 days ago Kim • 0

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167

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bsseq methylation

updated 5 weeks ago by James W. MacDonald 65k • written 5 weeks ago by ja569116 • 0

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552

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edgeR methylation

updated 3 months ago by Gordon Smyth 50k • written 3 months ago by sat • 0

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268

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Methylation minfi preprocessQuantile MethylationArrayData preprocessFunnorm

4 months ago kyj2226 • 0

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1.4k

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DMR Methylation R Gviz

updated 5 months ago by Robert Ivanek ▴ 730 • written 3.0 years ago by ltzhou • 0

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1.8k

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ChAMP champ methylation

updated 8 months ago by mike • 0 • written 4.1 years ago by jkong • 0

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2.0k

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ChAMP methylation BMIQ

updated 6 months ago by peter.brederlo • 0 • written 5.0 years ago by moldach ▴ 20

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1.4k

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minfi software error methylation illumina450k

updated 11 months ago by kuzn.di • 0 • written 8.4 years ago by pm2015 • 0

8 results • Page 1 of 1

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Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.