Bioconductor Normalized counts

Showing : normalized counts • reset

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1.7k

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scran scater normalized counts

updated 7.1 years ago by Aaron Lun ★ 29k • written 7.1 years ago by Radek ▴ 90

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1.6k

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deseq2 normalized counts

updated 7.2 years ago by Steve Lianoglou ★ 13k • written 7.2 years ago by anaQ • 0

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1.9k

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normalized counts log2

7.4 years ago agdif ▴ 10

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8.7k

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rnaseq deseq2 normalized counts

updated 7.7 years ago by Michael Love 43k • written 7.7 years ago by JoannaF ▴ 10

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6.6k

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deseq2 normalization normalized counts

updated 7.9 years ago by Michael Love 43k • written 7.9 years ago by naets_matthias • 0

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2.2k

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edger batch effect normalized counts

updated 8.0 years ago by Ryan C. Thompson ★ 7.9k • written 8.0 years ago by Yahan • 0

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1.8k

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deseq2 cqn normalization normalized counts

updated 8.3 years ago by Michael Love 43k • written 8.3 years ago by mark.ebbert • 0

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1.4k

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normalized counts grch37 grch38 r bioconductor

8.3 years ago salvocomplicazioni1 • 0

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2.2k

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cn.mops log normalized counts table

updated 8.5 years ago by Günter Klambauer ▴ 540 • written 8.5 years ago by falk.zakrzewski • 0

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1.9k

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deseq2 counts normalized counts

updated 9.5 years ago by Steve Lianoglou ★ 13k • written 9.5 years ago by snamjoshi87 ▴ 40

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2.6k

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shrna edger deseq2 differential expression normalized counts

9.5 years ago Jane Merlevede ▴ 90

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3.8k

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diffbind normalized counts

9.6 years ago GFM ▴ 20

12 results • Page 1 of 1

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Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20

Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?

Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0

Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…

Comment: Error message that there is no package called Biobase by DamionLedner99 • 0

thanks for sharing!!! https://cran.r-project.org/

Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0

Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…

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Answer: What happens to genes with low dispersion during dispersion shrinkage in DESeq2

Comment: Are transformed values from rlog /vst log2 normalized counts?

Answer: Are transformed values from rlog /vst log2 normalized counts?

A: DESeq2 normalization vs VST vs rlog

Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline

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Teacher to Michael Love 43k

Supporter to fl ▴ 20

Popular Question to James W. MacDonald 68k