Bioconductor Plotma

Showing : plotma • reset

vote

replies

612

views

plotMA ggplot2 plotPCA DESeq2

updated 6 months ago by Michael Love 41k • written 6 months ago by sara.jacobson • 0

vote

616

views

matrixsubset DESeq2 plotMA

updated 3.0 years ago by Michael Love 41k • written 3.0 years ago by l.troxler ▴ 10

votes

881

views

deseq2 plotMA rnaseq community analysis asymmetry

updated 4.2 years ago by Michael Love 41k • written 4.2 years ago by chaco001 • 0

vote

replies

958

views

agilent single channel plotMA background correction

updated 5.9 years ago by Gordon Smyth 50k • written 5.9 years ago by CantExitVIM ▴ 10

vote

replies

1.1k

views

deseq2 plotMA rnaseq logfoldchange

updated 6.2 years ago by Michael Love 41k • written 6.2 years ago by ap_vc21 • 0

vote

replies

2.6k

views

deseq2 plotma

6.6 years ago Yvan Wenger ▴ 50

vote

4.9k

views

rstudio r plotMA

6.9 years ago g.k • 0

votes

replies

4.8k

views

deseq2 rnaseq plotMA deseq rna-seq

updated 8.1 years ago by Michael Love 41k • written 8.1 years ago by sjs0282 • 0

votes

replies

3.7k

views

limma plotMA

updated 8.7 years ago by Gordon Smyth 50k • written 8.7 years ago by Lisa Cohen ▴ 50

votes

replies

2.4k

views

normalization deseq2 plotMA meanSDplot

8.7 years ago aravenscraft • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0