Bioconductor Plotpca

Showing : plotpca • reset

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1.3k

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Rstudio plotPCA DESeq2

2.1 years ago • updated 2.0 years ago yee • 0

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1.6k

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plotMA ggplot2 plotPCA DESeq2

updated 2.2 years ago by Michael Love 43k • written 2.2 years ago by sara.jacobson • 0

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6.2k

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plotPCA PCA

updated 2.7 years ago by hediatnani • 0 • written 2.7 years ago by Yijing • 0

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3.7k

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DESeq2 plotPCA

updated 18 months ago by Daniele • 0 • written 3.9 years ago by synat.keam • 0

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plotpca DESeq2

3.9 years ago bjen731 ▴ 10

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plotPCA DESeq2 RUVSeq removebatcheffect()

4.6 years ago elizabethe819 • 0

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DESeq2 RNASeq plotpca

updated 4.9 years ago by Michael Love 43k • written 4.9 years ago by s1760083 • 0

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1.6k

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deseq2 biplot plotpca

updated 5.9 years ago by Michael Love 43k • written 5.9 years ago by ecg1g15 ▴ 30

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954

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deseq2 PlotPCA draw.triple.venn

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by N. Perera • 0

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976

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deseq2 plotpca

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by snp31 • 0

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8.4k

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deseq2 plotpca PCa

updated 8.1 years ago by Michael Love 43k • written 8.1 years ago by lirongrossmann ▴ 80

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deseq2 rlog variancestabilizingtransformation plotpca pca

8.2 years ago lirongrossmann ▴ 80

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DESeq2 plotPCA rlog transformation vsd

8.4 years ago Jane Merlevede ▴ 90

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plotPCA deseq2 labels

updated 8.9 years ago by Federico Marini ▴ 180 • written 8.9 years ago by al-ash ▴ 50

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pca plotpca

9.2 years ago marianarochadesouza • 0

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deseq2 plotPCA PCA rna-seq

9.6 years ago newsomew13 • 0

16 results • Page 1 of 1

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Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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Popular Question to James W. MacDonald 68k