Bioconductor Plotpca

Showing : plotpca • reset

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1.3k

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Rstudio plotPCA DESeq2

23 months ago yee • 0

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1.5k

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plotMA ggplot2 plotPCA DESeq2

updated 2.1 years ago by Michael Love 43k • written 2.1 years ago by sara.jacobson • 0

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6.2k

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plotPCA PCA

updated 2.6 years ago by hediatnani • 0 • written 2.6 years ago by Yijing • 0

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3.6k

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DESeq2 plotPCA

updated 17 months ago by Daniele • 0 • written 3.8 years ago by synat.keam • 0

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10k

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plotpca DESeq2

3.8 years ago bjen731 ▴ 10

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2.1k

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plotPCA DESeq2 RUVSeq removebatcheffect()

4.5 years ago elizabethe819 • 0

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1.3k

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DESeq2 RNASeq plotpca

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by s1760083 • 0

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1.6k

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deseq2 biplot plotpca

updated 5.8 years ago by Michael Love 43k • written 5.8 years ago by ecg1g15 ▴ 30

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926

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deseq2 PlotPCA draw.triple.venn

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by N. Perera • 0

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962

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deseq2 plotpca

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by snp31 • 0

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8.4k

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deseq2 plotpca PCa

updated 8.0 years ago by Michael Love 43k • written 8.0 years ago by lirongrossmann ▴ 80

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4.1k

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deseq2 rlog variancestabilizingtransformation plotpca pca

8.1 years ago lirongrossmann ▴ 80

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3.8k

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DESeq2 plotPCA rlog transformation vsd

8.3 years ago Jane Merlevede ▴ 90

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50k

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plotPCA deseq2 labels

updated 8.8 years ago by Federico Marini ▴ 180 • written 8.8 years ago by al-ash ▴ 50

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pca plotpca

9.1 years ago marianarochadesouza • 0

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deseq2 plotPCA PCA rna-seq

9.5 years ago newsomew13 • 0

16 results • Page 1 of 1

Recent ...

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Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Comment: deseq2 filter the low counts by Michael Love 43k

> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…

Comment: deseq2 filter the low counts by empty_mt • 0

Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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