Bioconductor Processamplicons

Showing : processamplicons • reset

votes

replies

1.6k

views

edgeR processamplicons shrna

updated 8.5 years ago by thomas.leete • 0 • written 8.6 years ago by Anne Deslattes Mays ▴ 10

votes

replies

3.2k

views

edger processamplicons rstudio

updated 9.0 years ago by Aaron Lun ★ 28k • written 9.0 years ago by thomas.leete • 0

vote

replies

1.2k

views

processamplicons edger barcode

8.1 years ago lucia.caceres • 0

votes

1.4k

views

EdgeR CRISPR Barcode processamplicons

updated 6.0 years ago by sdalin • 0 • written 7.2 years ago by neggersjasper • 0

votes

replies

796

views

edger sgrna processamplicons

6.2 years ago Assa Yeroslaviz ★ 1.5k

votes

replies

1.6k

views

edger processamplicons sgrna crispr

updated 15 months ago by hyejo • 0 • written 6.2 years ago by Assa Yeroslaviz ★ 1.5k

votes

replies

699

views

processamplicons edgeR

updated 6.0 years ago by shepherl 3.9k • written 6.0 years ago by sdalin • 0

votes

846

views

edgeR processamplicons memory problem

5.8 years ago sdalin • 0

votes

replies

888

views

processamplicons

8.1 years ago lucia.caceres • 0

votes

replies

1.2k

views

processamplicons

updated 8.0 years ago by Matthew Ritchie ▴ 1000 • written 8.0 years ago by lucia.caceres • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: Slightly different count plots from R and spreadsheet by ATpoint ★ 4.1k

I don't think it is the purpose of the support site to debug Excel behaviour. The issue might be how it combines replicates into a single v…

Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman by Karosham.Reddy • 0

Hi, I am having the same issues. What was the typo that you found? And were you able to solve the next problem?

Comment: recount3 problem downloading data from source sra by PABLO ANTONIO • 0

Hello Leonardo, Thanks for commenting on possible solutions. I noticed comparing your session info that I was using the previous version o…

Comment: seqlevelsStyle() not working by websterdelacruz2087055 • 0

Specify the new URL new_url <- "https://hgdownload2.cse.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz" Use the new URL to download th…

Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0

Yes, thank you. I have another error now, may you please guide me. here is the code that I used till using vep: ```r # bam_path <- "~/pat…

Votes

Including squared covariates to account for non-linear dependencies in differential gene expression analysis

DESeq2 DE gene expression of scRNA-seq pseudobulk

Answer: Multiple factor DSEq2 result generates weird volcano plot

DESeq2 for single cell pseudobulk processing

Simultaneously adding two different covariates in the model gives error in DESeq2.

Awards • All