Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
CRISPR
•
reset
0
votes
0
replies
596
views
Job:
Research Scientists/Postdoctoral Candidates/Computational Biologists and Programmers excited about computational challenges in modeling CRISPR genome…
CRISPR
SingleCell
Genomics
2.1 years ago
lpinello
• 0
0
votes
2
replies
1.4k
views
Using edgeR to analyze Cripsr/Cas9 Screening data
edger
processamplicons
sgrna
crispr
updated 9 months ago by
hyejo
• 0 • written 5.7 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
3
replies
871
views
Independent filtering of NGS data
independentfiltering
DESeq2
CRISPR
2.8 years ago
Rubén
• 0
6
votes
14
replies
1.7k
views
gRNAefficacy calculations in CRISPRseek
crisprseek
crispr
gRNAefficacy
grna
updated 3.2 years ago by
Julie Zhu
★ 4.3k • written 3.2 years ago by
Dawid G. Nowak
▴ 40
1
vote
0
replies
759
views
Job:
Postdoc/Bioinformatician Research Fellow @ Harvard Medical School/MGH/ Boston's Children Hospital
CRISPR
functional genomics
single cell
gene regulatory networks
Job
3.3 years ago
bauer
▴ 10
0
votes
0
replies
819
views
Job:
Scientist 1, Bioinformatics (Research | Berkeley, CA | Full Time)
Bioinformatics
drug-discovery
RNA-seq
CRISPR
Job
3.3 years ago
yzhang
• 0
0
votes
19
replies
1.8k
views
Help with using CRISPRseeker
CRISPR
updated 4.2 years ago by
Julie Zhu
★ 4.3k • written 4.3 years ago by
sharvari gujja
▴ 40
0
votes
1
reply
1.3k
views
EdgeR: run processAmplicons without barcodes
EdgeR
CRISPR
Barcode
processamplicons
updated 5.5 years ago by
sdalin
• 0 • written 6.7 years ago by
neggersjasper
• 0
0
votes
4
replies
1.9k
views
Adaptation of DESeq/edgeR model for CRISPR drop-out screen
crispr
edger
deseq
deseq2
updated 6.1 years ago by
Aaron Lun
★ 28k • written 6.1 years ago by
emanuelvgoncalves
• 0
0
votes
2
replies
1.2k
views
How to start CrispRVariants with fastq file starting point
R
crispr
fastq
7.0 years ago
kfburbach
• 0
0
votes
6
replies
1.6k
views
Manipulating random CRISPR sequences
r
crispr
updated 7.5 years ago by
mousheng xu
▴ 10 • written 8.1 years ago by
shane
• 0
1
vote
1
reply
1.2k
views
CRISPRseek R package: description of output fields that are unclear
crisprseek
R
CRISPR
sgRNA
updated 7.8 years ago by
Julie Zhu
★ 4.3k • written 7.8 years ago by
alexgraehl
▴ 20
2
votes
27
replies
3.4k
views
CRISPRseek package: be aware that as of Oct 2015, CRISPRseek works best for for regions < 200kb
crisprseek
sgrna
crispr
cas9
R
8.2 years ago • updated 8.1 years ago
alexgraehl
▴ 20
13 results • Page
1 of 1
Recent ...
Replies
Comment: Result from GSEA for non-model organism not as expected
by
James W. MacDonald
64k
I asked you in a previous thread to **not add comments to old threads** and instead start a new one. Please follow that advice. It's fine i…
Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and
by
James W. MacDonald
64k
This is something you should be able to work out on your own. When you get an error, you have to read it and try to figure out what it mean…
Comment: Subtracting INPUT reads from ChIP read counts.
by
ann-sophie.gironne
• 0
Hi Rory! I'm trying to scale my bigwig files so the visualization on IGV matches what the DiffBind analysis results, being that the sample…
Comment: Ensembl down???
by
James W. MacDonald
64k
Yup, they seem to be down. What exactly are you trying to do? There may be other options.
Answer: Result from GSEA for non-model organism not as expected
by
Aastha Kapoor
• 0
I have a similar issue, I have transcriptome data of an inhouse sequenced bacterial genome. I made the database for that bacteria using mak…
Votes
Comment: Ensembl down???
Answer: Limma/DESeq2 for unbalanced nested design (paired samples)
Result from GSEA for non-model organism not as expected
Comment: DESeq2 estimateSizeFactors iterate takes too long
Answer: DESeq2 estimateSizeFactors iterate takes too long
Awards
• All
Scholar
to
Mike Smith
★ 6.2k
Scholar
to
Hervé Pagès
16k
Popular Question
to
bas_work
▴ 20
Popular Question
to
James W. MacDonald
64k
Popular Question
to
A
▴ 40
Locations
• All
United Kingdom,
2 minutes ago
United States,
3 minutes ago
United Kingdom,
11 minutes ago
Republic of Ireland,
12 minutes ago
Canada,
15 minutes ago
Traffic: 910 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6