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Comment: Cannot install Phyloseq and dada2
by
Guido Hooiveld
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3.2k
Did you notice this message:?
Installation paths not writeable, unable to update packages
path: C:/Program Files/R/R-4.0.0/libra…
Comment: Use of shrunken LFCs to address questions about the distribution of LFCs between
by
i.sudbery
▴
20
Thanks Mike. I might have a play with stratifying by expression level.
One reason I wasn't looking at gene set testing is that its the nul…
Answer: submitting a BSgenome package
by
deisianyufg
•
0
From my Github repository. I am sorry, I thought the package was already released and realize now that is still only in my github reposito…
Comment: PlotPCA in DESeq2 doesn't produce exactly the same result as prcomp
by
swbarnes2
▴
970
Is the one plot a mirror image of the other?
Answer: Use of shrunken LFCs to address questions about the distribution of LFCs between
by
Michael Love
35k
hi Ian,
Great question, and good to be concerned that the mean expression may be a confounder for either analysis, Why not stratify your…
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