Biostar CRISPR

Showing : CRISPR • reset

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486

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edger processamplicons sgrna crispr

updated 4 months ago by mridulchaudhary93 • 0 • written 3.4 years ago by Assa Yeroslaviz ★ 1.5k

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245

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independentfiltering DESeq2 CRISPR

6 months ago • updated 5 months ago Rubén • 0

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539

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crisprseek crispr gRNAefficacy grna

updated 10 months ago by Julie Zhu ★ 4.3k • written 11 months ago by Dawid G. Nowak ▴ 40

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194

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CRISPR functional genomics single cell gene regulatory networks Job

11 months ago bauer ▴ 10

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207

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Bioinformatics drug-discovery RNA-seq CRISPR Job

11 months ago yzhang • 0

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663

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CRISPR

updated 23 months ago by Julie Zhu ★ 4.3k • written 23 months ago by sharvari gujja ▴ 30

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737

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EdgeR CRISPR Barcode processamplicons

updated 3.2 years ago by sdalin • 0 • written 4.4 years ago by neggersjasper • 0

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1.1k

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crispr edger deseq deseq2

updated 3.7 years ago by Aaron Lun ★ 27k • written 3.7 years ago by emanuelvgoncalves • 0

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610

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R crispr fastq

4.7 years ago kfburbach • 0

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925

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r crispr

updated 5.2 years ago by mousheng xu ▴ 10 • written 5.8 years ago by shane • 0

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752

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crisprseek R CRISPR sgRNA

updated 5.5 years ago by Julie Zhu ★ 4.3k • written 5.5 years ago by alexgraehl ▴ 20

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1.9k

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crisprseek sgrna crispr cas9 R

5.8 years ago • updated 5.7 years ago alexgraehl ▴ 20

12 results • Page 1 of 1

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Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way by Michael Love 33k

Q1: No I meant just use your results from above that you called "the first way". Not sub-setting, as you will have worse dispersion estimat…

Comment: Best practice for quantifying sncRNA by Abhishek • 0

I wonder what would be a good metric to assess the quantification quality

Comment: Best practice for quantifying sncRNA by Abhishek • 0

Thank you for sharing your thoughts. I used Salmon and indexed using hg38 gencodes transcriptome. After the tximport step, I ended up gett…

Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way by Ming ▴ 350

Thx so much for the diagnosis and advice. Indeed, in my data, some genes have all 0 for all sampes of a contrast for both "Mut" and "WT" gr…

Comment: Best practice for quantifying sncRNA by Steve Lianoglou 13k

> It's my opinion that miRNA is a mirage intended to make MDs salivate and biostatisticians wail in misery, but what do I know? I'll tell …

Votes

Comment: Idea: Using DESeq2 to test a change in ratio of two genes

Time Series Analysis

Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels

Answer: Time series DE gene analysis with edgeR where specific timepoints have NA levels

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