Biostar CRISPR

Showing : CRISPR • reset

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353

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CRISPR SingleCell Genomics

15 months ago lpinello • 0

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912

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edger processamplicons sgrna crispr

updated 22 months ago by mridulchaudhary93 • 0 • written 4.9 years ago by Assa Yeroslaviz ★ 1.5k

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589

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independentfiltering DESeq2 CRISPR

2.0 years ago • updated 24 months ago Rubén • 0

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1.1k

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crisprseek crispr gRNAefficacy grna

updated 2.4 years ago by Julie Zhu ★ 4.3k • written 2.4 years ago by Dawid G. Nowak ▴ 40

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491

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CRISPR functional genomics single cell gene regulatory networks Job

2.5 years ago bauer ▴ 10

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527

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Bioinformatics drug-discovery RNA-seq CRISPR Job

2.5 years ago yzhang • 0

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1.2k

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CRISPR

updated 3.4 years ago by Julie Zhu ★ 4.3k • written 3.4 years ago by sharvari gujja ▴ 40

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1.0k

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EdgeR CRISPR Barcode processamplicons

updated 4.7 years ago by sdalin • 0 • written 5.9 years ago by neggersjasper • 0

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1.5k

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crispr edger deseq deseq2

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by emanuelvgoncalves • 0

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897

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R crispr fastq

6.2 years ago kfburbach • 0

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1.2k

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r crispr

updated 6.7 years ago by mousheng xu ▴ 10 • written 7.3 years ago by shane • 0

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968

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crisprseek R CRISPR sgRNA

updated 7.0 years ago by Julie Zhu ★ 4.3k • written 7.0 years ago by alexgraehl ▴ 20

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2.5k

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crisprseek sgrna crispr cas9 R

7.3 years ago • updated 7.2 years ago alexgraehl ▴ 20

13 results • Page 1 of 1

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Comment: transcript name mapping between human and mouse by Eric • 0

It works very well, and thanks for such a great answer! Because I use the old version gtf from GENECODE (vM12), the id version does not mat…

Comment: How to normalize long-read RNA-seq data for comparison with short-reads by Bernardo • 0

Just did that, thank you for the suggestion.

Comment: Empty ChipQC Report by Okan • 0

Hi, I have the same issue. Have you found any solution or any reason why this is happening?

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by Gordon Smyth 47k

Am I understanding correctly that you have 24 RNA-seq libraries in total, 6 from the pooled samples and 18 from regular samples with biolog…

Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper by k.roelfs • 0

I'm sorry, I know it is kinda confusing... We have 6 pools in total: Phenotype A: T1a, T2, T1b, T1c Phenotype B: T1, T2 Each pool consist…

Votes

Answer: transcript name mapping between human and mouse

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Volcano Plot in R

Answer: Replicating iDEP parameters in DESeq2; two conditions and an interaction term.

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