5
votes
2
replies
2.6k
views
4
votes
4
replies
2.1k
views
3
votes
2
replies
1.6k
views
updated 7.3 years ago by
Michael Love
41k
•
written 7.3 years ago by
le2336
▴
20
3
votes
2
replies
1.8k
views
updated 4.6 years ago by
Michael Love
41k
•
written 4.6 years ago by
Nik dAK
▴
10
2
votes
10
replies
5.1k
views
2
votes
3
replies
3.2k
views
updated 5.1 years ago by
Michael Love
41k
•
written 5.1 years ago by
Yonatan Amzaleg
•
0
2
votes
5
replies
2.3k
views
updated 9.2 years ago by
James W. MacDonald
65k
•
written 9.2 years ago by
eb0906
•
0
1
vote
2
replies
2.8k
views
updated 5.8 years ago by
Aaron Lun
★
28k
•
written 5.8 years ago by
ivansilbern
•
0
1
vote
13
replies
912
views
updated 3 months ago by
Kevin Blighe
★
3.9k
•
written 4 months ago by
samer
▴
10
0
votes
0
replies
903
views
8.7 years ago
efratdahan21
•
0
0
votes
2
replies
642
views
updated 14 months ago by
Michael Love
41k
•
written 14 months ago by
fepesanz8
•
0
0
votes
1
reply
1.2k
views
updated 8.5 years ago by
rnbeads
•
0
•
written 8.5 years ago by
Jon Manning
▴
40
Recent ...
Replies
Answer: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
Hi Michael,
I think there is something wrong with the generation of nullranges. I was working with small RNA and methylation overlaps. …
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★
1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19 (as at 4 May 2024).
In the meantime, you could consider using the goana() and kegga() …
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part:
```
design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa)
colnames(design_intercept) <- c("AltSHP_LA","Al…
Votes
Awards
• All
Popular Question to
Gordon Smyth
50k
Popular Question to
Zainab
•
0
Popular Question to
Theo
▴
10
Popular Question to
gene_bioconductor
▴
10
Popular Question to
rohitsatyam102
▴
20
Locations
• All
WEHI, Melbourne, Australia, just now
The city by the bay, 15 minutes ago
Sweden, 16 minutes ago
United States, 28 minutes ago
UPF, Barcelona, Spain, 38 minutes ago
WEHI, Melbourne, Australia, just now
The city by the bay, 15 minutes ago
Sweden, 16 minutes ago
United States, 28 minutes ago
UPF, Barcelona, Spain, 38 minutes ago
Traffic: 520 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6