Bioconductor Rownames

Showing : rownames • reset

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help DESeq2 DESeqDataSetFromMatrix rownames

updated 2.5 years ago by Sanatan • 0 • written 3.6 years ago by dorina.jamniczky • 0

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5.4k

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deseq2 rownames

updated 3.2 years ago by Michael Love 42k • written 4.4 years ago by corellig ▴ 10

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1.2k

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rownames replace characters

updated 4.8 years ago by Gordon Smyth 51k • written 4.8 years ago by ph.shimaasherif • 0

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2.1k

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WGCNA wgcna rownames

updated 7.2 years ago by Peter Langfelder ★ 3.0k • written 7.2 years ago by je.maxfield • 0

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2.4k

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phyloseq merge_samples rownames error

8.2 years ago newmanss • 0

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1.6k

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DEXSeq rownames pre-filtering

updated 8.8 years ago by Wolfgang Huber ★ 13k • written 8.8 years ago by arom2 • 0

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1.3k

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multiple sequences masks rowmask rownames biostrings

updated 8.9 years ago by Valerie Obenchain ★ 6.8k • written 8.9 years ago by ben.ward ▴ 30

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2.6k

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heatmap rownames genes

9.2 years ago johnlee.johnson • 0

8 results • Page 1 of 1

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Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k

You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…

Answer: HilBertVis install error by James W. MacDonald 67k

It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…

Comment: Identical samples after deseq2 batch effect removal by maripane • 0

Thanks Michael for quick reply. Actually, I also questioned this but later i saw this issue happens within another cluster and different c…

Answer: Identical samples after deseq2 batch effect removal by Michael Love 42k

> 2 of my treatment samples have identical normalised gene expression for all genes. This sounds like a quantification / sample labeling…

Answer: Downloading Metagenomic Data with Higher Taxonomic Units by Levi Waldron ★ 1.1k

I'm sorry I missed the first post! Yes, it is easy to agglomerate ranks in curatedMetagenomicData datasets. See the example in the vignette…

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A: TopGO: How to retrieve the gene list related to a GO ID ?

A: Error in DESeqDataSet : some values in assay are not integers

A: correcting the batch effects in Limma and SVA

A: Using of limma moderated t-test with "corrected" expression matrix resulting fr

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