Showing : ruuid • reset
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package ‘Ruuid’ is not available (as a binary package for R version 3.1.3)
ruuid biocinstaller
updated 10.6 years ago by ★ 13k • written 10.6 years ago by • 0
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1.9k
views
GGtools and GGBase installation problems
Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase
updated 14.8 years ago by 6.7k • written 14.8 years ago by ▴ 460
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1.6k
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Can not invoke Ruuid package in updated Mac OS X
Ruuid Ruuid
updated 14.8 years ago by 6.7k • written 14.8 years ago by ▴ 290
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1.8k
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Can not install Ruuid package in a linux server
Ruuid Ruuid
updated 14.8 years ago by 6.7k • written 14.8 years ago by ▴ 290
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1.1k
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PGSEA and Ruuid
Ruuid PGSEA Ruuid PGSEA
16.9 years ago Daniel Klevebring ▴ 80
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1.1k
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Unable to load Ruuid in R 2.8.1
Ruuid Ruuid
16.9 years ago Daniel Klevebring ▴ 80
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1
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1.7k
views
GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 17.6 years ago by 25k • written 17.6 years ago by ▴ 130
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1
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1.3k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer Ruuid tkWidgets graph GOstats Cancer Ruuid tkWidgets graph GOstats
updated 18.4 years ago by ▴ 10 • written 18.4 years ago by ★ 7.4k
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1.1k
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Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid tkWidgets graph GOstats Ruuid tkWidgets graph GOstats
18.4 years ago Michael Parisi ▴ 10
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1.5k
views
[R] problem loading affycoretools - solved!
Biobase Ruuid genefilter multtest graph limma gcrma matchprobes affyPLM RBGL simpleaffy
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ★ 2.2k
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2
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1.8k
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problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
19.3 years ago Jenny Drnevich ★ 2.2k
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blocking in limma gives an estimability problem
GO hgu95av2 Ruuid multtest affy graph limma RBGL qvalue Category affyio GO hgu95av2
19.5 years ago Pedro López Romero ▴ 360
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2.0k
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Ruuid had non-zero exit status
Ruuid Ruuid
updated 19.5 years ago by ★ 7.4k • written 19.5 years ago by ▴ 50
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1
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1.2k
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 19.9 years ago by 68k • written 19.9 years ago by ▴ 890
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6
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2.1k
views
Many missing GO terms from GOHyperG call using mgu74av2
GO Survival hgu95av2 mgu74av2 Ruuid annotate multtest affy graph annaffy RBGL GOstats
updated 20.5 years ago by ★ 7.4k • written 20.5 years ago by ★ 1.4k
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Ruuid requires specific MAKEFLAGS setting on Fedora Core 2
Ruuid Rgraphviz PROcess Ruuid Rgraphviz PROcess
updated 20.5 years ago by ▴ 80 • written 20.5 years ago by ▴ 70
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4
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1.6k
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Ruuid installation problems
Ruuid Ruuid
20.8 years ago raffaele calogero ▴ 500
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1.6k
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error in loading affy (R 2.0), Thank you
Normalization GO Clustering moe430a moe430b probe Ruuid rhdf5 multtest affy graph limma
21.1 years ago Pintilie, Melania ▴ 50
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2.0k
views
Rv1.91 or v2.0.0 on MacOS 10.3.5
SAGE GO Kidney hgu95av2 hu6800 rae230a cdf Biobase Ruuid DynDoc annotate edd multtest
updated 21.1 years ago by ★ 5.5k • written 21.1 years ago by ▴ 100
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2
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2.0k
views
Problem installing graph package
Ruuid rhdf5 graph hexbin Rgraphviz Ruuid rhdf5 graph hexbin Rgraphviz
updated 21.1 years ago by ★ 5.5k • written 21.1 years ago by ▴ 50
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0
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1.0k
views
Ruuid: Can't install on OSF1
Ruuid Ruuid
21.2 years ago Michael Hoffman ▴ 30
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3
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1.6k
views
Rgraphviz install issues
Ruuid Rgraphviz Ruuid Rgraphviz
updated 21.2 years ago by ▴ 30 • written 21.2 years ago by ▴ 280
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3
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1.6k
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package Ruuid
Ruuid Ruuid
21.3 years ago Alberto Goldoni ▴ 360
0
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3
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1.9k
views
Recent changes to Bioconductor packages
Microarray Ruuid graph limma EBarrays Microarray Ruuid graph limma EBarrays
21.8 years ago • updated 21.7 years ago madman@jimmy.harvard.edu ▴ 850
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Win32 packages
Ruuid rhdf5 affyPLM RdbiPgSQL Ruuid rhdf5 affyPLM RdbiPgSQL
22.2 years ago Jeff Gentry ★ 3.9k
0
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4
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2.4k
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installation problem
Ruuid genefilter rhdf5 multtest affy graph Rgraphviz RBGL Ruuid genefilter rhdf5 affy
updated 22.2 years ago by 6.7k • written 22.2 years ago by ▴ 30
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3
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1.7k
views
Recent changes to Bioconductor packages
Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase
22.7 years ago • updated 22.6 years ago madman@jimmy.harvard.edu ▴ 850
27 results • Page 1 of 1
Recent ...
Replies
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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Popular Question to James W. MacDonald 68k
Popular Question to Gordon Smyth 53k
Commentator to sina.nassiri ▴ 130
Popular Question to Hervé Pagès 16k
Popular Question to jared.andrews07 ▴ 30
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