Showing : ruuid • reset
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package ‘Ruuid’ is not available (as a binary package for R version 3.1.3)
ruuid biocinstaller
updated 8.9 years ago by ★ 13k • written 8.9 years ago by • 0
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2
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1.5k
views
GGtools and GGBase installation problems
Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase
updated 13.2 years ago by 6.7k • written 13.2 years ago by ▴ 460
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1
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1.3k
views
Can not invoke Ruuid package in updated Mac OS X
Ruuid Ruuid
updated 13.2 years ago by 6.7k • written 13.2 years ago by ▴ 290
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3
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1.5k
views
Can not install Ruuid package in a linux server
Ruuid Ruuid
updated 13.2 years ago by 6.7k • written 13.2 years ago by ▴ 290
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0
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836
views
PGSEA and Ruuid
Ruuid PGSEA Ruuid PGSEA
15.3 years ago Daniel Klevebring ▴ 80
0
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0
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877
views
Unable to load Ruuid in R 2.8.1
Ruuid Ruuid
15.3 years ago Daniel Klevebring ▴ 80
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1
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1.4k
views
GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 16.0 years ago by 25k • written 16.0 years ago by ▴ 130
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1
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982
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer Ruuid tkWidgets graph GOstats Cancer Ruuid tkWidgets graph GOstats
updated 16.8 years ago by ▴ 10 • written 16.8 years ago by ★ 7.4k
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907
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid tkWidgets graph GOstats Ruuid tkWidgets graph GOstats
16.8 years ago Michael Parisi ▴ 10
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1
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1.3k
views
[R] problem loading affycoretools - solved!
Biobase Ruuid genefilter multtest graph limma gcrma matchprobes affyPLM RBGL simpleaffy
updated 17.7 years ago by ★ 7.4k • written 17.7 years ago by ★ 2.2k
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2
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1.5k
views
problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
17.7 years ago Jenny Drnevich ★ 2.2k
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1.1k
views
blocking in limma gives an estimability problem
GO hgu95av2 Ruuid multtest affy graph limma RBGL qvalue Category affyio GO hgu95av2
17.9 years ago Pedro López Romero ▴ 360
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8
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1.5k
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Ruuid had non-zero exit status
Ruuid Ruuid
updated 17.9 years ago by ★ 7.4k • written 17.9 years ago by ▴ 50
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1
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906
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.3 years ago by 65k • written 18.3 years ago by ▴ 890
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6
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1.4k
views
Many missing GO terms from GOHyperG call using mgu74av2
GO Survival hgu95av2 mgu74av2 Ruuid annotate multtest affy graph annaffy RBGL GOstats
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ★ 1.4k
0
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2
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926
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Ruuid requires specific MAKEFLAGS setting on Fedora Core 2
Ruuid Rgraphviz PROcess Ruuid Rgraphviz PROcess
updated 18.9 years ago by ▴ 80 • written 18.9 years ago by ▴ 70
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4
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1.1k
views
Ruuid installation problems
Ruuid Ruuid
19.2 years ago raffaele calogero ▴ 500
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0
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1.3k
views
error in loading affy (R 2.0), Thank you
Normalization GO Clustering moe430a moe430b probe Ruuid rhdf5 multtest affy graph limma
19.5 years ago Pintilie, Melania ▴ 50
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1
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1.7k
views
Rv1.91 or v2.0.0 on MacOS 10.3.5
SAGE GO Kidney hgu95av2 hu6800 rae230a cdf Biobase Ruuid DynDoc annotate edd multtest
updated 19.5 years ago by ★ 5.5k • written 19.5 years ago by ▴ 100
0
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2
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1.5k
views
Problem installing graph package
Ruuid rhdf5 graph hexbin Rgraphviz Ruuid rhdf5 graph hexbin Rgraphviz
updated 19.5 years ago by ★ 5.5k • written 19.5 years ago by ▴ 50
0
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0
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794
views
Ruuid: Can't install on OSF1
Ruuid Ruuid
19.6 years ago Michael Hoffman ▴ 30
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3
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1.2k
views
Rgraphviz install issues
Ruuid Rgraphviz Ruuid Rgraphviz
updated 19.6 years ago by ▴ 30 • written 19.6 years ago by ▴ 280
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3
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1.3k
views
package Ruuid
Ruuid Ruuid
19.6 years ago Alberto Goldoni ▴ 360
0
votes
3
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1.4k
views
Recent changes to Bioconductor packages
Microarray Ruuid graph limma EBarrays Microarray Ruuid graph limma EBarrays
20.1 years ago madman@jimmy.harvard.edu ▴ 850
0
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0
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772
views
Win32 packages
Ruuid rhdf5 affyPLM RdbiPgSQL Ruuid rhdf5 affyPLM RdbiPgSQL
20.5 years ago Jeff Gentry ★ 3.9k
0
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4
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1.9k
views
installation problem
Ruuid genefilter rhdf5 multtest affy graph Rgraphviz RBGL Ruuid genefilter rhdf5 affy
updated 20.6 years ago by 6.7k • written 20.6 years ago by ▴ 30
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3
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1.2k
views
Recent changes to Bioconductor packages
Biobase Ruuid DynDoc tkWidgets affy graph Rgraphviz AnnBuilder RBGL PROcess Biobase
21.1 years ago • updated 21.0 years ago madman@jimmy.harvard.edu ▴ 850
27 results • Page 1 of 1
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Comment: Reproducibility issue with scran together with lapply and BiocParallel by ATpoint ★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
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C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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