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scRNASeq
•
reset
0
votes
0
replies
41
views
scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
RNASeq
scRNAseq
3 days ago
Bibi
• 0
0
votes
2
replies
964
views
Single-Cell Data Simulation from Bulk RNA-seq
SingleCell
RNASeq
RNASeqData
scRNAseq
updated 5 weeks ago by
wichaidi
• 0 • written 18 months ago by
irvin.ng
• 0
0
votes
1
reply
156
views
Can you find the correct transcript in scRNA seq data
scRNAseq
RNAseq
updated 6 weeks ago by
ATpoint
★ 4.1k • written 6 weeks ago by
Merav
• 0
0
votes
2
replies
259
views
Non-empty droplets versus good quality cells
CellRanger
emptyDrops
scRNAseq
10X
9 weeks ago
rocanja
▴ 60
0
votes
1
reply
269
views
How to select cells that represents more accurately a cluster in a scRNA-seq dataset?
scRNAseq
updated 12 weeks ago by
ATpoint
★ 4.1k • written 12 weeks ago by
sodiogoes
• 0
1
vote
2
replies
925
views
ScRNAseq analysis scran :: quickcluster Error
scRNAseq
quickcluster
scRNA
scran
5 months ago
ruba-mahmoud
• 0
1
vote
11
replies
3.7k
views
Error: Bioconductor version cannot be validated; no internet connection?
scRNAseq
updated 6 months ago by
Manuel
• 0 • written 10 months ago by
Elham
• 0
0
votes
2
replies
705
views
Could not find function "Standard Chromosomes"
scrna
scRNAseq
updated 7 months ago by
Gabriella
• 0 • written 14 months ago by
sarah.jobbins
• 0
0
votes
2
replies
549
views
scRNA analysis : DEG between low and high-expressing cells
scRNAseq
7 months ago
Momo
• 0
1
vote
5
replies
893
views
Recommendation for large.n in filterByExpr
scRNAseq
edgeR
SingleCellExperiment
9 months ago
duez.tolga
• 0
0
votes
1
reply
402
views
FALSE error when checking a pre made sample data
Rstudio
scRNAseq
DESeq2
updated 9 months ago by
ATpoint
★ 4.1k • written 9 months ago by
DrFizz
• 0
0
votes
1
reply
1.1k
views
DESeq2 error after installing BiocManager
scRNAseq
RStudio
DESeq2
updated 9 months ago by
ATpoint
★ 4.1k • written 9 months ago by
DrFizz
• 0
4
votes
3
replies
1.1k
views
Custom design for scRNA DGE with pseudobulking
scRNAseq
scrna
paireddesign
edgeR
pseudobulking
updated 9 months ago by
Gordon Smyth
50k • written 9 months ago by
garcia
• 0
0
votes
1
reply
428
views
If highly-expressed genes are upregulated, what happens to genes with lower expression after normalization?
scRNA
scRNAseq
updated 9 months ago by
ATpoint
★ 4.1k • written 9 months ago by
Omer
• 0
0
votes
1
reply
586
views
library(topGO) query
topGO
scRNAseq
updated 10 months ago by
Basti
▴ 780 • written 10 months ago by
Francesco
• 0
0
votes
0
replies
370
views
adding noise to scRNA Seq counts
scRNAseq
10 months ago
Jiyuan
• 0
2
votes
3
replies
1.3k
views
P-value histogram of testLinearModel is not uniform
smart-seq2
scRNAseq
scran
11 months ago
Lluís Revilla Sancho
▴ 730
17 results • Page
1 of 1
Recent ...
Replies
Comment: pathview error
by
Fara
• 0
Thank you for the reply. I already conducted the KEGG enrichment analysis and I got the pathway ID. So there is no doubt it cannot be map…
Comment: Not able to install any Bioconductor 3.18 package [unable to access index]
by
bravaccinimirea
• 0
I am experiencing the same problem, I tried with all the advices I found in similar posts but nothing seems to work
Comment: can't open mghp.osn.xsede.org
by
merv
▴ 120
Seeing this issue today, now with the R 4.3 + Bioc 3.18 version of this package. It is the Bioconductor servers that redirect to this unrel…
Comment: Help with infinite recursion - non-zero exit status in installation of GenomeInf
by
Brandon
▴ 20
I did try again...*repeatedly*...I even tried it on a VM. Thankfully I got it to work on the VM. I still can't get it to work on windows t…
Comment: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.1k
Hi, What do you get if you run the following `httr::HEAD()` command? I noticed that you have `libcurl` version 8.3.0 from `curl::curl_vers…
Votes
can't open mghp.osn.xsede.org
Answer: can't open mghp.osn.xsede.org
Help with infinite recursion - non-zero exit status in installation of GenomeInfoDbData
Help with infinite recursion - non-zero exit status in installation of GenomeInfoDbData
Comment: recount3 problem downloading data from source sra
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