Bioconductor Seqinr

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3.2k

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seqinr choose bank error message

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by jayanthisahithi ▴ 10

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3.7k

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seqinr fasta

updated 8.7 years ago by Hervé Pagès 16k • written 8.7 years ago by Angel ▴ 40

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4.5k

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multiple sequences bioconductor rstudio seqinr

updated 7.2 years ago by Martin Morgan 25k • written 7.2 years ago by Riot • 0

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736

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seqinr

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by daviqd.halvorsen • 0

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954

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fastq fast seqinr

updated 2.1 years ago by ATpoint ★ 4.0k • written 2.1 years ago by hank00000 • 0

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1.2k

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shuffle regioner seqinr

updated 7.4 years ago by Martin Morgan 25k • written 7.4 years ago by Dimitris Polychronopoulos ▴ 80

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1.1k

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R seqinr biostrings

5.6 years ago rabalski • 0

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957

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rmysql fastq seqinr ngs sangerseqr

6.0 years ago JoeMG • 0

8 results • Page 1 of 1

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Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k

I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…

Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k

Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0