Bioconductor Source

Showing : source • reset

vote

replies

1.4k

views

oligo source Install

10 months ago • updated 9 months ago Guido Hooiveld ★ 4.1k

votes

replies

804

views

Source flowCore Repository git

updated 23 months ago by shepherl 4.1k • written 23 months ago by dominic.r • 0

votes

replies

4.3k

views

biocinstaller installation install source conda

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by jol.espinoz ▴ 40

vote

replies

13k

views

biocinstaller source

9.4 years ago • updated 9.3 years ago michel.renou • 0

votes

replies

2.2k

views

security http source installation

updated 9.8 years ago by Dan Tenenbaum ★ 8.2k • written 9.8 years ago by will.townes • 0

votes

2.6k

views

edgeR rpkm source code

updated 9.9 years ago by Martin Morgan 25k • written 9.9 years ago by thibault.lorin ▴ 10

6 results • Page 1 of 1

Recent ...

Replies

Comment: DiffBind custom normalization factor by Abbie • 0

Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2? by James W. MacDonald 68k

All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…

Comment: Using TPM from tximport of Salmon output for singscore by Kent • 0

Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…

Comment: Using TPM from tximport of Salmon output for singscore by Michael Love 43k

For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…

Comment: DESeq2 model - How to test case/control time course model when taking account wi by Michael Love 43k

I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …

Votes

clusterProfiler-GO enrichment Error

A: Machine learning in R book

Data preparation and Machine learning on time course RNAseq data

Answer: Use of org.Rn.eg.db with GRCr8 reference genome

Awards • All

Popular Question to Dario Strbenac ★ 1.6k