Bioconductor Standard error

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1.5k

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deseq2 log2fc standard error timecourse

updated 6.7 years ago by ellascottgm • 0 • written 6.7 years ago by Verena • 0

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19k

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deseq2 deseq lfc lfcse standard error

updated 7.6 years ago by rraadd_8 • 0 • written 7.7 years ago by tootiki • 0

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2.8k

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metagenomeseq logfc paired samples standard error

updated 2.3 years ago by tom830979 • 0 • written 8.1 years ago by manasishah86 ▴ 30

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2.2k

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edger standard error glmfit

8.4 years ago david.hughes • 0

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2.5k

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limma standard error

8.4 years ago José Luis Lavín ▴ 10

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11k

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rnaseq deseq2 deseq standard error confidence interval

updated 3.0 years ago by Michael Love 42k • written 8.6 years ago by lisa.crossman ▴ 10

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effect size Limma toptable Standard Error

updated 9.3 years ago by Gordon Smyth 51k • written 9.3 years ago by Vani ▴ 20

7 results • Page 1 of 1

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Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Ai • 0

Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …

Answer: Annotation for EPICv2 by icecreamlover • 0

Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…

Votes

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

Answer: DecideTest vs topTAGs in edgeR

Comment: DESeq Input from Salmon + tximport/tximeta

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