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News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
6 weeks ago
Maria Doyle
▴ 90
0
votes
0
replies
783
views
News:
Bioconductor Carpentries instructor training
teaching
Carpentries
2.0 years ago
Maria Doyle
▴ 90
13
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3
replies
2.5k
views
News:
Bioconductor teaching week
teaching
Carpentries
written 2.2 years ago by
Laurent Gatto
1.6k
1
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0
replies
937
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Job:
Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational
teaching
statistics
research
2.3 years ago
Andy Lynch
▴ 120
0
votes
0
replies
1.1k
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Job:
Bioconductor Community Manager
Community
Teaching
Bioconductor
2.5 years ago • updated 2.4 years ago
Matthew Ritchie
▴ 1000
0
votes
0
replies
1.5k
views
Job:
Research software engineer at the de Duve Institute, UCLouvain (Brussels, Belgium)
software engineer
job
teaching
bioconductor
Job
6.1 years ago
Laurent Gatto
1.6k
8
votes
12
replies
10k
views
EdgeR: Explaning dispersion types to newbies
edger
dispersion
estimatedispersions
visualization
teaching
updated 6.4 years ago by
Aaron Lun
★ 28k • written 6.4 years ago by
Mr.RB
▴ 20
1
vote
1
reply
1.9k
views
News:
New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
computational biology
bioinformatics
teaching
master
News
updated 8.3 years ago by
Chloe2013025
• 0 • written 8.4 years ago by
enridomenici
▴ 10
5
votes
1
reply
3.6k
views
News:
Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication
workflows
benchmark
teaching
News
updated 8.6 years ago by
thomas.ingraham
▴ 10 • written 8.6 years ago by
Wolfgang Huber
★ 13k
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Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column
by
GV Yoshikawa
• 0
Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…
Answer: Differential Expression Analysis with unbalanced batches without replication bet
by
Gordon Smyth
51k
> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Adam
• 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Comment: Problem at champ.load
by
icecreamlover
• 0
Hello! Were you able to figure this out? I am running into the same error!
Comment: ChAMP - obtaining beta values using EPICv2 annotation
by
icecreamlover
• 0
Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…
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A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
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Gordon Smyth
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Guido Hooiveld
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shepherl
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