Showing : transcriptome • reset
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Convert transcriptomic bam to genomic bam?
ensembldb transcriptome genome coordinateconversion
updated 20 months ago by 43k • written 21 months ago by ▴ 10
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1
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926
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Transcriptome assembly: single individual or pooled samples
transcriptome splicing assembly
updated 3.1 years ago by 68k • written 3.1 years ago by ▴ 20
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1.1k
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low mapping between annotated genome and transcriptome
transcriptome Annotation mapping
3.7 years ago Ava • 0
2
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1
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How to know which soft threshold to use for blockwise modules in WGCNA?
wgcna coexpression transcriptome
updated 7.9 years ago by ★ 3.0k • written 7.9 years ago by ▴ 40
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What is the recommended method for running WGCNA on large metatranscriptomic dataset?
wgcna transcriptome big data metagenomics gene expression
7.9 years ago jol.espinoz ▴ 40
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Read Illumina BeadArray control table into Limma
limma microarray transcriptome
updated 9.2 years ago by 53k • written 9.2 years ago by • 0
6 results • Page 1 of 1
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Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0
Sounds good. @[time][1] [1]: https://timeduration.github.io
Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0
For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…
Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k
Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…
Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by aqeel • 0
Discover the pinnacle of Brazilian Jiu Jitsu gear at [Dragon][1] GI. [1]: https://dragongi.com/
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by Gordon Smyth 53k
I refered you to the DiffVar package 11 months ago. Did you consider it? Your clarification makes it clear that your issue is not with lim…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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