Bioconductor Translation

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genomicranges genomicfeatures translation

updated 3 months ago by russ.bainer ▴ 10 • written 8.5 years ago by madsheilskov ▴ 10

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844

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point mutation aminoacid translation

updated 7 months ago by jtremblay514 • 0 • written 5.9 years ago by chandu.ncbs • 0

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605

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event translation community

22 months ago kozo.nishida • 0

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776

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Translation Biostrings

2.8 years ago emmanuel.verde2939 • 0

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950

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customprodb translation

updated 5.8 years ago by xiaojing.wang ▴ 50 • written 6.1 years ago by georges.bedran • 0

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5.9k

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translation

updated 7.2 years ago by Martin Morgan 25k • written 7.2 years ago by XIA.PAN ▴ 20

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6.1k

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convert translation

written 9.5 years ago by tomas.bjorklund ▴ 20

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1.0k

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translation pairwisealignment

7.8 years ago igferres • 0

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1.6k

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cancer translation ngs genomics Job

9.2 years ago jhjohnsn • 0

9 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k

You can get the `EnsDb` EnsDb.Taestivum.v112.sqlite (for Ensembl 112/ ensemblgenomes 59) [here](https://www.dropbox.com/sh/msic0luivbldmb7/…

Comment: Errors in chromosome annotation-biomaRt by blackwidowzzz • 0

I recommend using a different dataset specific to your rat genome assembly version 8. You can search for available datasets within Ensembl …

Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 66k

If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …

Comment: Help with ENmix readidat by James W. MacDonald 66k

Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …

Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 66k

In that case, probably easiest to subset to the groups being compared.

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Answer: Error retrieving ensembl gene id using biomaRt...

Comment: LRT, more than two conditions and pairwise comparisons

Answer: Control group between 2 batches have different expression in RNAseq data

Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?

Comment: DESeq2- Mysterious interaction suppresses DEGs

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