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UNIPROT
•
reset
2
votes
5
replies
6.4k
views
UniprotKB AC/ID to Entrez ID Conversion
ID
Uniprot
EntrezID
3.7 years ago
tom.kloter
• 0
3
votes
11
replies
8.3k
views
GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
clusterProfiler
AnnotationHub
GO
uniprot
updated 2.0 years ago by
Guido Hooiveld
★ 4.1k • written 5.0 years ago by
Alberto
• 0
1
vote
1
reply
1.9k
views
UniProt.ws - Speeding up select() for data retrieval
UniProt.ws
UniProt
updated 5.2 years ago by
James W. MacDonald
68k • written 5.2 years ago by
JavierM
• 0
2
votes
3
replies
1.7k
views
Uniprot and UniProt.ws
Uniprot
Annotation
Identifiers
6.8 years ago
Juliet Hannah
▴ 360
4
votes
2
replies
1.4k
views
drawProteins from Uniprot entry (missing chain information)
drawProteins
uniprot
updated 7.0 years ago by
James W. MacDonald
68k • written 7.0 years ago by
mblango
• 0
1
vote
4
replies
1.9k
views
UniProt.ws non-functional or abandoned?
uniprot.ws
uniprot
uniprot accessions
updated 7.3 years ago by
James W. MacDonald
68k • written 7.3 years ago by
balin
• 0
0
votes
2
replies
1.6k
views
Error retrieving data with biomaRt
biomart
r
getbm
uniprot
8.0 years ago
lluex.rova
• 0
0
votes
1
reply
1.7k
views
UniProt.ws - single database for two species
uniprot.ws
uniprot
updated 8.3 years ago by
James W. MacDonald
68k • written 8.3 years ago by
l.nilse
• 0
0
votes
1
reply
2.4k
views
org.Mm.eg.db UNIPROT missing values
Annotation
mouse
UNIPROT
updated 8.4 years ago by
Mike Smith
★ 6.6k • written 8.4 years ago by
julie.chevalier
• 0
1
vote
7
replies
2.9k
views
UniProt.ws report 1:many mappings in a single row
uniprot.ws
UniProt
annotation
9.2 years ago
l.nilse
• 0
0
votes
3
replies
1.6k
views
Accessing feature data of a Malus domestica Nimblegen microarray
nimblegen
Biomart
Uniprot
updated 9.2 years ago by
Gordon Smyth
53k • written 9.2 years ago by
theobroma22
▴ 10
4
votes
1
reply
2.3k
views
Converting Protein Accessions Into Protein Symbols
uniprot
uniprot.ws
10.0 years ago • updated 9.9 years ago
Dario Strbenac
★ 1.6k
2
votes
4
replies
4.2k
views
UniProt.ws version 2.10.2
uniprot.ws
subcellular location
uniprot
10.0 years ago
DHS
• 0
0
votes
3
replies
2.0k
views
Anotations Score of uniprot. ws
uniprot.ws
uniprot
updated 10.2 years ago by
James W. MacDonald
68k • written 10.2 years ago by
cerikahp
• 0
2
votes
2
replies
1.8k
views
Is there a package that has Uniprot protein descriptions?
uniprot.ws
uniprot
uniprot accessions
software error
updated 10.2 years ago by
James W. MacDonald
68k • written 10.2 years ago by
john
▴ 10
2
votes
14
replies
4.9k
views
Unimart not available in 2015?
biomart
uniprot
unimart
10.2 years ago
john
▴ 10
1
vote
4
replies
5.7k
views
problem with retrieving UniProt annotation data
uniprot.ws
uniprot
updated 11.0 years ago by
Marc Carlson
★ 7.2k • written 11.0 years ago by
Guido Hooiveld
★ 4.1k
0
votes
6
replies
3.2k
views
converting UniProt to SGD ids using UniProt.wd
uniprot.ws
uniprot
ensembl
updated 11.1 years ago by
Marc Carlson
★ 7.2k • written 11.1 years ago by
Joseph Barry
▴ 160
0
votes
2
replies
2.2k
views
Missing ensembl_ids in biomaRt uniprot query
biomaRt
uniprot
ensembl
updated 11.2 years ago by
me
• 0 • written 11.2 years ago by
António Miguel de Jesus Domingues
▴ 510
19 results • Page
1 of 1
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Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name
by
Korneel
• 0
Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…
Comment: Pathway abundance data from Curatedmetagenomics
by
yesquokkan
• 0
Hello, I was also wondering about the same issue. Did you figure it out?
Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2
by
colinmccornack
• 0
FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name
by
Erik Wright
▴ 160
This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…
Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?)
by
a2a2ddrhaa
• 0
For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…
Votes
Answer: Subsetting data verses contrasts [DESeq2]?
A: WGCNA differences two groups 10 replicates each group
A: WGCNA sample size minimum: why?
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name
Answer: Can you colour dendrogram branch clusters in pheatmap?
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