0
votes
3
replies
3.8k
views
0
votes
3
replies
1.2k
views
0
votes
1
reply
1.1k
views
updated 16.3 years ago by
Kasper Daniel Hansen
★
6.5k
•
written 16.3 years ago by
Ron
▴
40
0
votes
0
replies
773
views
0
votes
0
replies
962
views
16.9 years ago
jane janes
▴
20
0
votes
3
replies
1.3k
views
updated 17.2 years ago by
Nianhua Li
▴
870
•
written 17.2 years ago by
jane janes
▴
20
0
votes
3
replies
934
views
updated 18.1 years ago by
Seth Falcon
★
7.4k
•
written 18.1 years ago by
Narendra Kaushik
▴
150
0
votes
2
replies
999
views
updated 19.3 years ago by
Colin A. Smith
▴
220
•
written 19.3 years ago by
Jacob Michaelson
▴
320
0
votes
0
replies
884
views
19.9 years ago
Phguardiol@aol.com
▴
720
0
votes
1
reply
1.4k
views
updated 20.0 years ago by
Wolfgang Huber
★
13k
•
written 20.0 years ago by
A.J. Rossini
▴
810
0
votes
0
replies
816
views
20.4 years ago
Colin A. Smith
▴
220
0
votes
0
replies
960
views
0
votes
0
replies
727
views
20.4 years ago
Colin A. Smith
▴
220
0
votes
0
replies
625
views
0
votes
0
replies
732
views
20.4 years ago
Colin A. Smith
▴
220
0
votes
0
replies
1.1k
views
20.4 years ago
Colin A. Smith
▴
220
0
votes
0
replies
727
views
20.4 years ago
Fujito Atsuya
▴
20
Recent ...
Replies
Answer: ATACseq merge peaks
by
ATpoint
★
4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴
10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★
4.0k
I do not know this decontamination tool you use but generally:
If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
•
0
Thank you for your comment!
I'll review my code from top to bottom.
Votes
Awards
• All
Scholar to
Michael Love
41k
Scholar to
James W. MacDonald
65k
Popular Question to
Gordon Smyth
50k
Popular Question to
Chris
•
0
Locations
• All
United States, just now
Germany, 3 minutes ago
United States, 7 minutes ago
Ireland, 20 minutes ago
UPF, Barcelona, Spain, 24 minutes ago
United States, just now
Germany, 3 minutes ago
United States, 7 minutes ago
Ireland, 20 minutes ago
UPF, Barcelona, Spain, 24 minutes ago
Traffic: 990 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6