0
votes
11
replies
3.2k
views
mzR crashes R
mzR mzR
updated 12.8 years ago by 1.6k • written 12.8 years ago by ★ 13k
0
votes
3
replies
2.1k
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duplicate 'row.names' are not allowed from biocLite.R
12.8 years ago Pawel Eljasz ▴ 20
0
votes
0
replies
915
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Finding mismatches between reads and reference sequence
12.8 years ago David Greber ▴ 30
0
votes
1
reply
1.4k
views
BitSeq getExpression crash
Alignment PROcess BitSeq Alignment PROcess BitSeq
updated 12.8 years ago by ▴ 70 • written 12.8 years ago by ▴ 30
0
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2
replies
2.4k
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Problem loading the "affxparser" dependency of the "oligo" package.
affxparser oligo affxparser oligo
updated 12.8 years ago by ▴ 20 • written 12.8 years ago by ★ 2.4k
0
votes
0
replies
2.0k
views
Is it possible to get SRA sample attributes for a given sample or experiment ID?
SRAdb SRAdb
12.8 years ago Vladimir Morozov ▴ 130
0
votes
1
reply
1.1k
views
cummerBund - how to get splicing events
updated 12.8 years ago by ★ 6.8k • written 12.8 years ago by ▴ 330
0
votes
1
reply
1.4k
views
enquiry about the limma script
Microarray limma Microarray limma
updated 12.8 years ago by 53k • written 12.8 years ago by ▴ 10
0
votes
0
replies
674
views
GSOC 2013?
12.8 years ago Guest User ★ 13k
0
votes
2
replies
897
views
Estimate how much a factor contributes to the variation
Microarray Cancer Microarray Cancer
updated 12.8 years ago by ★ 4.1k • written 12.8 years ago by ▴ 10
0
votes
10
replies
2.8k
views
Multifactor analysis with deseq
Normalization DESeq DESeq2 Normalization DESeq DESeq2
updated 12.8 years ago by ★ 3.8k • written 12.8 years ago by ▴ 420
0
votes
0
replies
957
views
Annotating Illumina Mouse Ref8 array in BRB
annotate annotate
12.8 years ago Tejas Tirodkar ▴ 10
0
votes
0
replies
1.5k
views
Background for test in SPIA package.
Annotation Pathways SPIA Annotation Pathways SPIA
12.8 years ago Ian Sudbery ▴ 30
0
votes
2
replies
1.3k
views
A question about the gage package
Microarray probe gage Microarray probe gage
12.8 years ago He, Yiwen NIH/CIT ▴ 360
0
votes
4
replies
1.8k
views
EdgeR multi-factor design questions
RNASeq edgeR RNASeq edgeR
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 30
0
votes
0
replies
857
views
Alternative to combineAffybatch
12.8 years ago Nicolas Servant ▴ 40
0
votes
0
replies
1.1k
views
[Fwd: RE: Rdisop]
Rdisop Rdisop
12.8 years ago Dan Tenenbaum ★ 8.2k
0
votes
2
replies
2.0k
views
installing Rdisop
Rdisop BiocInstaller Rdisop BiocInstaller
updated 12.8 years ago by ★ 8.2k • written 12.8 years ago by ★ 13k
0
votes
2
replies
2.5k
views
EdgeR-tophat
edgeR edgeR
12.8 years ago Asma rabe ▴ 290
0
votes
1
reply
995
views
Subsetting vcf file by subject
VariantAnnotation Annotation VariantAnnotation VariantAnnotation Annotation VariantAnnotation
updated 12.8 years ago by ★ 6.8k • written 12.8 years ago by ▴ 10
0
votes
0
replies
812
views
Visualize metabolic network using table with reactions
12.8 years ago Denis Kazakiewicz ▴ 70
0
votes
1
reply
1.3k
views
Problem loading the "affxparser" dependency of the "oligo" package.
oligo oligo
updated 12.8 years ago by ★ 2.4k • written 12.8 years ago by ▴ 20
0
votes
1
reply
3.0k
views
Large logCPM values when using offsets in edgeR for normalization
Sequencing edgeR cqn EDASeq Sequencing edgeR cqn EDASeq
updated 12.8 years ago by 53k • written 12.8 years ago by ▴ 90
0
votes
0
replies
1.4k
views
CAMDA 2013 Challenge: Big Data in Life Sciences
Sequencing Microarray Genetics Classification Clustering Regression Sequencing Microarray
12.8 years ago CAMDA 2013 ▴ 30
0
votes
2
replies
910
views
introductory book
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 20
0
votes
2
replies
1.5k
views
Can\'t read canine CEL file with ReadAffy()
updated 12.8 years ago by ▴ 140 • written 12.8 years ago by ★ 13k
0
votes
0
replies
916
views
AssignChromosomeRegion in ChIPpeakAnno 2.7.3
12.8 years ago Julie Zhu ★ 4.3k
0
votes
5
replies
11k
views
how to operate on a DNAStringSet object
BSgenome BSgenome BSgenome BSgenome
12.8 years ago Chris Seidel ▴ 80
0
votes
2
replies
887
views
slow query
updated 12.8 years ago by ★ 7.2k • written 12.8 years ago by ★ 13k
0
votes
4
replies
1.3k
views
what is the difference between AssayTechnologies and AssayDomains
12.8 years ago wang peter ★ 2.0k
0
votes
1
reply
2.2k
views
enrichment of GO terms based on input gene list
GO hgu95av2 GO hgu95av2
updated 12.8 years ago by ▴ 570 • written 12.8 years ago by ★ 13k
0
votes
14
replies
3.4k
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(no subject)
DESeq DESeq
updated 12.8 years ago by ▴ 20 • written 12.8 years ago by ▴ 30
0
votes
7
replies
2.0k
views
edgeR: glmLRT test
edgeR edgeR
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 420
0
votes
5
replies
3.9k
views
DESeq2
Normalization Classification Clustering DESeq cqn DESeq2 Normalization Classification cqn
updated 12.8 years ago by 43k • written 12.8 years ago by ★ 13k
0
votes
1
reply
1.8k
views
col.summary error in snpStats
SNP Sequencing Annotation snpMatrix snpStats SNP Sequencing Annotation snpMatrix snpStats
updated 12.8 years ago by 6.7k • written 12.8 years ago by ▴ 10
0
votes
1
reply
1.4k
views
5000 nodes RCytoscape
Network graph Network graph
12.8 years ago Paul Shannon ▴ 750
0
votes
0
replies
962
views
cmarrt.peak function does not work
probe probe
12.8 years ago Susan Wilson ▴ 50
0
votes
17
replies
3.4k
views
Testing for no change in RNA-seq data?
limma limma
updated 12.8 years ago by ★ 3.8k • written 12.8 years ago by ★ 7.9k
0
votes
7
replies
14k
views
Applying DESeq on RSEM output
edgeR DESeq edgeR DESeq
updated 4.8 years ago by • 0 • written 12.8 years ago by ▴ 30
0
votes
0
replies
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views
GWASTools
Organism GWASTools Organism GWASTools SNPRelate
12.8 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.5k
views
Fragen zu Gviz
Gviz Gviz
12.8 years ago florian.hahne@novartis.com ★ 1.6k
0
votes
1
reply
1.1k
views
(minfi) Return value from dmpFinder
GO GO
updated 12.8 years ago by ★ 4.2k • written 12.8 years ago by ▴ 10
0
votes
1
reply
4.8k
views
EdgeR vs voom, what to consider when deciding which to use
RNASeq qPCR edgeR RNASeq qPCR edgeR
updated 12.8 years ago by ★ 13k • written 12.8 years ago by ▴ 330
0
votes
0
replies
1.3k
views
about expression value generated by SCAN UPC package
SCAN.UPC SCAN.UPC
12.8 years ago gregory voisin ▴ 430
1
vote
2
replies
3.0k
views
Annotation problem through org.Mm.eg.db
RNASeq RNASeq
updated 12.8 years ago by ★ 7.2k • written 12.8 years ago by ▴ 180
0
votes
0
replies
1.8k
views
nsFilter give error saying \"invalid subscripts type \'list\'\"
12.8 years ago Guest User ★ 13k
0
votes
0
replies
1.5k
views
A question about GWASTools package
cdf GWASTools cdf GWASTools
12.8 years ago Stephanie M. Gogarten ▴ 890
1
vote
4
replies
2.0k
views
Is GO.db out of date?
Transcription GO Transcription GO
12.8 years ago chawla ▴ 190
0
votes
14
replies
3.8k
views
BiocGenerics 0.5.6 not loading properly
Rsamtools BiocGenerics Rsamtools BiocGenerics
updated 12.8 years ago by ★ 8.2k • written 12.8 years ago by ▴ 200
0
votes
1
reply
1.8k
views
Unable to install package
updated 12.8 years ago by ★ 8.2k • written 12.8 years ago by ▴ 10
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