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Gordon Smyth
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Recent ...
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Comment: Development of MSstat workflow to analyze DIA time series data
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Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
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Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
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Your follow-up question is very much wider than the first, and is essentially a research question rather a software question. As one of the…
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There is an example of how you can do this in the [DESeq vignette][1].
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