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7
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updated 15.9 years ago by ▴ 310 • written 15.9 years ago by ★ 4.3k
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P-values to Z-scores
updated 15.9 years ago by ▴ 90 • written 15.9 years ago by ★ 1.3k
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Ensembl mart release 57: Useful information
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15.9 years ago Rhoda Kinsella ▴ 660
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15.9 years ago Hervé Pagès 16k
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A question about org.Hs.egMAPCOUNTS
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15.9 years ago Hervé Pagès 16k
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Rintact equivalent in BioC2.6?
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0
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Loop design - biological, technical replication
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15.9 years ago boczniak767 ▴ 740
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read.DNAStringSet
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updated 15.9 years ago by ★ 1.7k • written 15.9 years ago by ▴ 60
0
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Call for papers: BCBGC-10, USA, July 2010
15.9 years ago John Edward ▴ 80
0
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6
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xps import data derived from different batches
15.9 years ago Steve Shen ▴ 330
0
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7
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where to download 'probeset.cvs' file for creating scheme file
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updated 15.9 years ago by ★ 3.9k • written 15.9 years ago by ▴ 330
0
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2
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chip-seq data analysis
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updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 60
0
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KEGGgraph fails on a KEGG XML file
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updated 15.9 years ago by ▴ 340 • written 15.9 years ago by ▴ 120
0
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Problem with xps package installation on Mac platform
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updated 15.9 years ago by ▴ 50 • written 15.9 years ago by ★ 3.9k
0
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Cosmo Background model
probe cosmo probe cosmo
15.9 years ago Prashantha Hebbar ▴ 260
0
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Loop design - biological, technical replication and contrasts
limma limma
updated 15.9 years ago by ▴ 740 • written 15.9 years ago by 53k
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Cosmo background model
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15.9 years ago Prashantha Hebbar ▴ 260
0
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1
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963
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rtrackalyer too slow?
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updated 15.9 years ago by ★ 11k • written 15.9 years ago by ▴ 350
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IRanges RangedData - possible bug?
Cancer Cancer
updated 15.9 years ago by ★ 1.6k • written 15.9 years ago by ▴ 740
0
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1
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Protein Codes to Protein Names
updated 15.9 years ago by ▴ 370 • written 15.9 years ago by ▴ 540
0
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4
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affyPara: background correction & normalization only?
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updated 15.9 years ago by ▴ 380 • written 15.9 years ago by ▴ 30
0
votes
8
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chip-chip data
updated 15.9 years ago by ▴ 410 • written 15.9 years ago by ▴ 380
0
votes
1
reply
1.5k
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hgu133a : probe ids to gene symbols
probe probe
updated 15.9 years ago by 21k • written 15.9 years ago by ★ 1.1k
0
votes
2
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1.4k
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retrieveGenomicFeatureAnnotation.R file supplied with Ringo
biomaRt Ringo biomaRt Ringo
updated 15.9 years ago by ▴ 450 • written 15.9 years ago by ★ 1.3k
0
votes
1
reply
995
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Xlaevis probe sequence file for gcRMA not found.
xenopuslaevis probe gcrma xenopuslaevis probe gcrma
updated 15.9 years ago by 68k • written 15.9 years ago by ▴ 20
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votes
3
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3.1k
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trouble using help() after loading IRanges and [tcl] grab failed and possible tcltk problem
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updated 15.9 years ago by 16k • written 15.9 years ago by ▴ 350
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4
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Using annotation maps as environments in packages
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updated 15.9 years ago by 16k • written 15.9 years ago by ▴ 40
0
votes
0
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859
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experience with rankproduct vs. limma - combining results
15.9 years ago Hildebrand, Georg ▴ 30
0
votes
2
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1.6k
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ensembl annotation coordinate did not match that from UCSC genome browser using ucscTableQuery
updated 15.9 years ago by ★ 13k • written 15.9 years ago by ▴ 220
0
votes
1
reply
1.2k
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R package for analyzing MS/MS spectra
updated 15.9 years ago by ▴ 260 • written 15.9 years ago by ▴ 340
0
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3
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PCA or concordance
Proteomics Proteomics
updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 80
0
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1
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R / R+ Webminar *** R-PLUS Rocks: Interactive, Comprehensible and Highly Visual. March 12th @ 12PM ET (USA Time)
updated 15.9 years ago by ▴ 30 • written 15.9 years ago by ▴ 570
0
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0
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mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
Annotation GO Mus musculus PROcess topGO Annotation GO Mus musculus PROcess topGO
15.9 years ago Dick Beyer ★ 1.4k
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votes
3
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1.9k
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GEOquery not working, NCBI changes?
GEOquery GEOquery
updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 110
0
votes
2
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mistmatch in GO terms between topGO_1.14.0 and org.Mm.eg.db_2.3.6
GO Mus musculus PROcess topGO GO Mus musculus PROcess topGO
updated 15.9 years ago by 21k • written 15.9 years ago by ★ 1.4k
0
votes
0
replies
907
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Help on Cosmo back ground model
probe cosmo probe cosmo
15.9 years ago Prashantha Hebbar ▴ 260
0
votes
2
replies
1.6k
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getSeq error with multiple inqueries, BSgenome
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updated 15.9 years ago by 16k • written 15.9 years ago by ▴ 220
0
votes
0
replies
644
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affycomp updated in release branch
15.9 years ago Harris A. Jaffee ▴ 590
0
votes
9
replies
4.3k
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heatmap for high number of genes
updated 15.9 years ago by ★ 13k • written 15.9 years ago by ▴ 240
0
votes
0
replies
805
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landscape genetics analysis
Genetics Genetics
15.9 years ago milton ruser ▴ 20
0
votes
0
replies
1.6k
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GEOquery question -- suppressing download for GPL queries?
Annotation GEOquery GEOmetadb Annotation GEOquery GEOmetadb
15.9 years ago Sean Davis 21k
0
votes
0
replies
860
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COURSE: Microarray Analysis in R (Bioconductor) from Imperial College
Microarray Microarray
15.9 years ago North, Bernard V ▴ 120
0
votes
2
replies
1.3k
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Loop design - biological, technical replication and contrasts
limma limma
updated 15.9 years ago by ▴ 240 • written 15.9 years ago by ▴ 740
0
votes
0
replies
949
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Help on Cosmo
probe cosmo probe cosmo
15.9 years ago Prashantha Hebbar Kiradi [MU-MLSC] ▴ 90
0
votes
14
replies
2.2k
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GO's to gene's
GO GO
updated 15.9 years ago by ★ 7.2k • written 15.9 years ago by ★ 1.0k
0
votes
4
replies
1.6k
views
makePDpackage
probe annotate probe annotate
updated 15.9 years ago by ★ 4.3k • written 15.9 years ago by ▴ 380
0
votes
0
replies
1.1k
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pair information of microRNA and Targets prediction
microRNA RmiR microRNA RmiR
15.9 years ago jrwang@itri.org.tw ▴ 60
0
votes
12
replies
3.8k
views
how to use rtracklayer to retrieve sequence of list of coordinates
rtracklayer rtracklayer
updated 15.9 years ago by ★ 13k • written 15.9 years ago by ▴ 220
0
votes
11
replies
2.0k
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RMA/QuantileNormalization results difference between oligo and aroma.affymetrix for Hugene
15.9 years ago Mikhail Pachkov ▴ 110
0
votes
0
replies
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Mapping using absolute coordinates
Alignment Alignment
15.9 years ago Ludo Pagie ▴ 20
46,730 results • Page 680 of 935
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Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
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The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
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Yes, so for one thing, note that Gordon has provided code for doing what you are asking in edgeR, which you can go ahead and use. You aske…
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