Bioconductor AnnotationHub

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 15 hours ago by Johannes Rainer ★ 2.0k • written 5.5 years ago by Guido Hooiveld ★ 4.0k

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5.1k

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BiocFileCache AnnotationHub ExperimentHub

6 months ago • updated 25 days ago shepherl 3.9k

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362

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DNAMethylation AnnotationHub EPICv2manifest annotation

updated 5 weeks ago by Tim Peters ▴ 180 • written 6 weeks ago by s.malik • 0

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5.9k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 9 weeks ago by shepherl 3.9k • written 2.3 years ago by jon.klonowski ▴ 40

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371

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Atlanticsalmon clusterPro Salmosalar AnnotationHub GeneOntology

updated 11 weeks ago by Michael Love 42k • written 11 weeks ago by Filipe • 0

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5.0k

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clusterProfiler AnnotationHub GO uniprot

updated 3 months ago by Guido Hooiveld ★ 4.0k • written 3.3 years ago by Alberto • 0

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183

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annotatr AnnotationHub

3 months ago hayleyw • 0

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4.5k

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AnnotationHub AnnotationForge Pseudomonas_aeruginosa

updated 5 months ago by James W. MacDonald 65k • written 17 months ago by Manmohit ▴ 10

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1.2k

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clusterProfiler Annotationhub

updated 6 months ago by Guido Hooiveld ★ 4.0k • written 6 months ago by BS • 0

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596

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tximeta AnnotationHub AnnotationHubData

7 months ago Thon • 0

10 results • Page 1 of 1

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Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Comment: maSigPro genes from clusters by anne-laure • 0

Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180