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Bioc
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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
Asia
BioCAsia
Conferences
Events
BioC
written 2.1 years ago by
Peter Hickey
▴ 740
0
votes
2
replies
715
views
can't update bioconductor 3.18
BioCor
bioc
BiocVersion
14 months ago
feifan
• 0
0
votes
1
reply
1.0k
views
JAVA_HOME cannot be determined on Windows on Bioconductor platform report
bioc
Bioconductor
updated 3.2 years ago by
Hervé Pagès
16k • written 3.2 years ago by
cannin
▴ 20
0
votes
1
reply
2.2k
views
Multiple R versions
R
bioc
updated 5.8 years ago by
Martin Morgan
25k • written 5.8 years ago by
pawan12394
• 0
0
votes
5
replies
2.0k
views
BioC happening in 2018?
BioC
2018
Course
7.4 years ago
s.munster
▴ 40
0
votes
1
reply
1.7k
views
Errors installing RforProteomics
Bioc
package installation
rforproteomics
updated 8.8 years ago by
Laurent Gatto
1.6k • written 8.8 years ago by
sarahgrogan
• 0
6 results • Page
1 of 1
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Comment: Cross-validation with multiple control subgroups in limma
by
Ali Barry
▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma
by
Gordon Smyth
52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
by
Robert Castelo
★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS
by
Aidan
▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
by
Michael Love
43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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