Bioconductor CATALYST

Showing : CATALYST • reset

votes

replies

653

views

visua Visualization CATALYST

22 months ago elefth.pavlos ▴ 40

votes

replies

1.1k

views

CATALYST

updated 2.2 years ago by SamGG ▴ 360 • written 3.2 years ago by David • 0

votes

replies

3.8k

views

CATALYST

updated 2.4 years ago by Hervé Pagès 16k • written 2.4 years ago by Hyoann ▴ 20

votes

replies

819

views

CATALYST

2.6 years ago Shaun • 0

votes

replies

1.7k

views

CATALYST

3.3 years ago David • 0

vote

replies

1.6k

views

CATALYST SingleCellExperiment

updated 4.8 years ago by helucro ▴ 70 • written 4.8 years ago by achaillon • 0

votes

replies

1.9k

views

CATALYST cytofWorkflow

updated 5.9 years ago by Martin Morgan 25k • written 5.9 years ago by Brent.OCarrigan • 0

votes

1.5k

views

CATALYST flowCore assignPrelim Error in vapply read.FCS

6.7 years ago j.krop • 0

8 results • Page 1 of 1

Recent ...

Replies

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…

Comment: Join BOC Sciences at Drug Discovery Chemistry by teamardigen • 0

Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0

I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…

Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k

Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…

Votes

DESeq2 for candidate gene analysis

Join BOC Sciences at Drug Discovery Chemistry

Drug datasets for RNA-seq

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Awards • All