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CATALYST
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0
votes
0
replies
735
views
Catalyst::cluster function does NOT produce the same results when setting seed
visua
Visualization
CATALYST
2.1 years ago
elefth.pavlos
▴ 40
0
votes
2
replies
1.2k
views
Invalid spillover matrix with values greater than 1
CATALYST
updated 2.5 years ago by
SamGG
▴ 360 • written 3.4 years ago by
David
• 0
2
votes
3
replies
4.1k
views
Keep getting this error "Warning: unable to access index for repository"?
CATALYST
updated 2.7 years ago by
Hervé Pagès
16k • written 2.7 years ago by
Hyoann
▴ 20
0
votes
0
replies
951
views
data truncation with sce2fcs()
CATALYST
2.9 years ago
Shaun
• 0
2
votes
2
replies
1.8k
views
Unable to download CATALYST
CATALYST
3.5 years ago
David
• 0
1
vote
3
replies
1.7k
views
singlecellexperiments markers after clustering
CATALYST
SingleCellExperiment
updated 5.1 years ago by
helucro
▴ 70 • written 5.1 years ago by
achaillon
• 0
2
votes
2
replies
2.0k
views
Updating package CATALYST
CATALYST
cytofWorkflow
updated 6.2 years ago by
Martin Morgan
25k • written 6.2 years ago by
Brent.OCarrigan
• 0
0
votes
1
reply
1.6k
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
7.0 years ago
j.krop
• 0
8 results • Page
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Comment: Bile acid analysis with limpa
by
ATpoint
★ 5.0k
Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
Comment: chemmineOB install help
by
Jeremy
• 0
I could install ChemmineOB on my MacBook Pro M1 Max using this procedure **1. Install open-babel and eigen using homebrew and create a cus…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
Gordon Smyth
53k
The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
chp265
• 0
Cool, glad to hear I wasn't missing some functionality in DESeq2. I don't know that much about the differences between DESeq2 vs edgeR; my …
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
Michael Love
43k
Yes, so for one thing, note that Gordon has provided code for doing what you are asking in edgeR, which you can go ahead and use. You aske…
Votes
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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