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Chimera
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reset
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1.7k
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Problem with prettyPrint (Chimera)
prettyPrint
Chimera
updated 8.4 years ago by
mrp
• 0 • written 8.8 years ago by
anders
• 0
1
vote
4
replies
2.2k
views
chimera error after update to R 3.2
chimera
IRanges
updated 10.0 years ago by
raffaele calogero
▴ 500 • written 10.5 years ago by
kelly.rabionet
▴ 10
0
votes
5
replies
3.6k
views
Problem Importing STAR fusion data into chimera
fusion genes
chimera
star
updated 10.8 years ago by
richa_r
• 0 • written 11.1 years ago by
am26
• 0
1
vote
5
replies
3.0k
views
Single end STAR Chimeric.out.junction fails to read with chimera::importFusionData
chimera
STAR
updated 10.8 years ago by
rcaloger
▴ 500 • written 10.9 years ago by
wresch
• 0
0
votes
0
replies
2.2k
views
News:
RNAseq data analysis courses: Torino (Italy) : Beginner course March 17-19 2015 & Advance Course April 14-16 2015
rnaseq
mirna
onechannelgui
chimera
News
11.0 years ago
raffaele calogero
▴ 500
0
votes
1
reply
2.2k
views
molecular viz tools (eg, PyMol) and R?
chimera
chimera
updated 17.4 years ago by
Thomas Girke
★ 1.7k • written 17.4 years ago by
Paul Shannon
★ 1.1k
6 results • Page
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Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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