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onechannelgui
•
reset
0
votes
0
replies
932
views
News:
Initial List of Deprecated Packages for Bioc3.6
deprecate
EWCE
MAIT
stepwiseCM
onechannelgui
News
4.8 years ago
shepherl
3.1k
0
votes
3
replies
1.1k
views
problem with oneChannelGUI
onechannelgui
exon array analysis
R
6.6 years ago
anna.dolnik
• 0
0
votes
3
replies
8.9k
views
How to combine expression values of multiple probes for one gene
probe
convert
geneexpression
onechannelgui
updated 6.9 years ago by
svlachavas
▴ 780 • written 6.9 years ago by
ayanava18
▴ 10
0
votes
0
replies
1.3k
views
News:
RNAseq data analysis courses: Torino (Italy) : Beginner course March 17-19 2015 & Advance Course April 14-16 2015
rnaseq
mirna
onechannelgui
chimera
News
7.4 years ago
raffaele calogero
▴ 500
0
votes
0
replies
709
views
oneChannelGUI - setting APT tools folder
software error
microarray
onechannelgui
7.6 years ago
nextgenseq.bioinfo
• 0
0
votes
0
replies
612
views
Introductory workshop for RNA-seq 27-28 March 2013, Torino, Italy
Network
oneChannelGUI
Network
oneChannelGUI
9.3 years ago
raffaele calogero
▴ 500
0
votes
0
replies
678
views
problems with oneChannelGUI
affylmGUI
oneChannelGUI
ASSIGN
affylmGUI
oneChannelGUI
ASSIGN
10.2 years ago
Manuela Di Russo
▴ 70
0
votes
1
reply
718
views
Basic question about GENE 1.0 ST
biomaRt
oneChannelGUI
biomaRt
oneChannelGUI
updated 10.4 years ago by
David Ruau
▴ 60 • written 10.4 years ago by
Guido Leoni
▴ 200
0
votes
2
replies
955
views
conditions to apply BH correction
oneChannelGUI
oneChannelGUI
updated 11.0 years ago by
Pavel Goldstein
▴ 70 • written 11.0 years ago by
Loredana Le Pera
▴ 10
0
votes
1
reply
672
views
Problem with oneChannelGUI
oneChannelGUI
oneChannelGUI
updated 11.2 years ago by
Guido Leoni
▴ 200 • written 11.2 years ago by
rcaloger
▴ 500
0
votes
5
replies
687
views
Problem with oneChannelGUI
oneChannelGUI
oneChannelGUI
updated 11.2 years ago by
Martin Morgan
25k • written 11.2 years ago by
Guido Leoni
▴ 200
0
votes
2
replies
824
views
Problems running oneChannelGUI
probe
oneChannelGUI
probe
oneChannelGUI
updated 11.5 years ago by
Mark Cowley
▴ 910 • written 11.5 years ago by
Marcos Pinho
▴ 200
0
votes
8
replies
1.1k
views
oneChannelGUI
Rgraphviz
affylmGUI
oneChannelGUI
Rgraphviz
affylmGUI
oneChannelGUI
updated 11.5 years ago by
raffaele calogero
▴ 500 • written 11.5 years ago by
Marcos Pinho
▴ 200
0
votes
0
replies
1.2k
views
annotations of Human Gene 1.0 ST microarray and oneChannelGUI
Microarray
Normalization
probe
oneChannelGUI
Microarray
Normalization
probe
oneChannelGUI
11.7 years ago
rcaloger
▴ 500
0
votes
0
replies
976
views
annotations of Human Gene 1.0 ST microarray and oneChannelGUI
Microarray
Normalization
GO
probe
oneChannelGUI
Microarray
Normalization
GO
probe
11.7 years ago
ifig319@ifi.csic.es
▴ 10
0
votes
0
replies
695
views
Different result from gcrma function by using command line gcrma, affylmGUI and oneChannelGUI.
gcrma
affylmGUI
oneChannelGUI
gcrma
affylmGUI
oneChannelGUI
11.8 years ago
Lin Ying
▴ 10
0
votes
8
replies
1.0k
views
oneChannelGUI and Affymetrix 1.0 ST arrays
GO
probe
oneChannelGUI
GO
probe
oneChannelGUI
updated 12.0 years ago by
rcaloger
▴ 500 • written 12.0 years ago by
Steve Taylor
▴ 280
0
votes
1
reply
715
views
Difficulty installing oneChannelGUI in Vista
Cancer
affylmGUI
oneChannelGUI
Cancer
affylmGUI
oneChannelGUI
updated 12.0 years ago by
James W. MacDonald
59k • written 12.0 years ago by
Richard Friedman
★ 2.0k
0
votes
0
replies
532
views
Exon array annotation with limma?
Annotation
oneChannelGUI
Annotation
oneChannelGUI
12.4 years ago
Michael Imbeault
▴ 220
0
votes
15
replies
1.3k
views
Exon array annotation with limma?
Normalization
limma
biomaRt
oneChannelGUI
Normalization
limma
biomaRt
oneChannelGUI
updated 12.4 years ago by
rcaloger
▴ 500 • written 12.4 years ago by
Michael Imbeault
▴ 220
0
votes
5
replies
751
views
different normalized results using oneChannelGUI, and oligo packages
Normalization
limma
oligo
oneChannelGUI
Normalization
limma
oligo
oneChannelGUI
updated 12.5 years ago by
Benilton Carvalho
★ 4.3k • written 12.5 years ago by
rcaloger
▴ 500
0
votes
1
reply
1.0k
views
different normalized results using oneChannelGUI and oligo packages
GO
limma
oligo
oneChannelGUI
GO
limma
oligo
oneChannelGUI
updated 12.5 years ago by
Benilton Carvalho
★ 4.3k • written 12.5 years ago by
Javier Pérez Florido
▴ 840
0
votes
1
reply
693
views
export contrast results in OneChannelGUI
limma
oneChannelGUI
limma
oneChannelGUI
updated 12.6 years ago by
rcaloger
▴ 500 • written 12.6 years ago by
Javier Pérez Florido
▴ 840
0
votes
0
replies
802
views
Analysing Human Gene ST 1.0 Arrays with oligo and, oneChannelGUI yield different number of probesets
Preprocessing
oneChannelGUI
Preprocessing
oneChannelGUI
12.6 years ago
rcaloger
▴ 500
0
votes
5
replies
1.6k
views
Analysing Human Gene ST 1.0 Arrays with oligo and oneChannelGUI yield different number of probesets
Preprocessing
cdf
oligo
oneChannelGUI
Preprocessing
cdf
oligo
oneChannelGUI
updated 12.6 years ago by
Benilton Carvalho
★ 4.3k • written 12.6 years ago by
Javier Pérez Florido
▴ 840
0
votes
0
replies
618
views
Question about inspecting splices indexes
Organism
probe
oneChannelGUI
Organism
probe
oneChannelGUI
12.9 years ago
raffaele calogero
▴ 500
0
votes
2
replies
730
views
Question about inspecting splices indexes (oneChannelGUI)
oneChannelGUI
oneChannelGUI
12.9 years ago
Guido Leoni
▴ 20
0
votes
0
replies
677
views
onechannelGUI error
probe
oneChannelGUI
probe
oneChannelGUI
13.0 years ago
rcaloger
▴ 500
0
votes
0
replies
541
views
onechannelGUI error,
probe
oneChannelGUI
probe
oneChannelGUI
13.0 years ago
PJARES@clinic.ub.es
▴ 30
0
votes
6
replies
1.2k
views
BioStrings questions
probe
oneChannelGUI
probe
oneChannelGUI
13.6 years ago
rcaloger
▴ 500
0
votes
0
replies
868
views
Problem with oneChannelGUI
GUI
Biobase
affy
affyio
oneChannelGUI
preprocessCore
GUI
Biobase
affy
affyio
13.9 years ago
Luc Vallieres
▴ 20
0
votes
1
reply
833
views
oneChannelGUI and hugene10stv1cdf
oneChannelGUI
oneChannelGUI
updated 14.0 years ago by
rcaloger
▴ 500 • written 14.0 years ago by
Steve Taylor
▴ 280
0
votes
3
replies
746
views
oneChannelGUI problem
graph
oneChannelGUI
graph
oneChannelGUI
updated 14.3 years ago by
raffaele calogero
▴ 500 • written 14.3 years ago by
marco fabbri
▴ 320
0
votes
0
replies
465
views
Errors in importing cel files into oneChannelGUI
probe
oneChannelGUI
probe
oneChannelGUI
14.6 years ago
Ester Feldmesser
▴ 60
34 results • Page
1 of 1
Recent ...
Replies
Comment: broken chain import in liftOver
by
Marcel Ramos
570
You could also try using one of the chain files in `AnnotationHub`, which gets auto-cached: ```r library(AnnotationHub) query(ah <- Annot…
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.
by
James W. MacDonald
59k
See `removeBatchEffect` in the `limma` package.
Comment: GDCdownload Directory Problem :(
by
Marcel Ramos
570
FWIW, `TCGAutils` is not a related package.
Comment: help please!
by
1051444231
• 0
I have updated Rtools
Comment: help please!
by
1051444231
• 0
> BiocManager::install("AnnotationDbi",force = TRUE) 'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' …
Votes
Answer: broken chain import in liftOver
Answer: toGRanges help!
Answer: toGRanges help!
Comment: CPM after RUVseq
A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
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