Bioconductor ColData

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258

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DESeq2 design coldata

updated 9 days ago by swbarnes2 ★ 1.4k • written 11 days ago by arfranco ▴ 130

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565

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ColData pheatmap DESeq2

written 10 months ago by dania.khalid • 0

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1.0k

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SingleCellExperiment colData rename

updated 15 months ago by Basti ▴ 780 • written 15 months ago by achoppe ▴ 10

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581

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BiSeq Coldata

4.0 years ago akhaira • 0

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1.4k

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deseq2 levels factor colData

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by ariel ▴ 20

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42k

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deseq2 coldata

updated 5.5 years ago by swbarnes2 ★ 1.4k • written 5.5 years ago by mjrarcher ▴ 10

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3.1k

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variantannotation coldata

updated 5.6 years ago by Valerie Obenchain ★ 6.8k • written 5.6 years ago by lvclark ▴ 10

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3.5k

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deseq2 coldata NA

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by t.kuilman ▴ 170

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1.5k

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multiassayexperiment colData

updated 6.4 years ago by Levi Waldron ★ 1.1k • written 6.4 years ago by Lluís Revilla Sancho ▴ 730

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Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by alex.pico ▴ 20

Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …

Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]' by bandconductor • 0

thanks! you have saved me so much time

Comment: Problem finding certain variables when importing a public database GSE73103 by Guido Hooiveld ★ 3.9k

FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…

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Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'

ChipQC 'names' attribute [9] must be the same length as the vector [2]'

A: DEXSeq time course design

using variable in design formula

differential expression for Single-cell RNAseq data using edgeR

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