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ColData
•
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0
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6
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258
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Once again a "Model matrix not full rank"
DESeq2
design
coldata
updated 9 days ago by
swbarnes2
★ 1.4k • written 11 days ago by
arfranco
▴ 130
0
votes
2
replies
565
views
Heat Map
ColData
pheatmap
DESeq2
written 10 months ago by
dania.khalid
• 0
0
votes
1
reply
1.0k
views
Rename colData column
SingleCellExperiment
colData
rename
updated 15 months ago by
Basti
▴ 780 • written 15 months ago by
achoppe
▴ 10
1
vote
0
replies
581
views
Understanding ColData in BiSeq
BiSeq
Coldata
4.0 years ago
akhaira
• 0
2
votes
2
replies
1.4k
views
How to extract factor levels of coldata from deseq object?
deseq2
levels
factor
colData
updated 5.2 years ago by
Michael Love
42k • written 5.2 years ago by
ariel
▴ 20
4
votes
8
replies
42k
views
What is colData? How do I make one?
deseq2
coldata
updated 5.5 years ago by
swbarnes2
★ 1.4k • written 5.5 years ago by
mjrarcher
▴ 10
1
vote
7
replies
3.1k
views
Data from ##SAMPLE lines in VCF?
variantannotation
coldata
updated 5.6 years ago by
Valerie Obenchain
★ 6.8k • written 5.6 years ago by
lvclark
▴ 10
0
votes
6
replies
3.5k
views
DESeq2: handling NA values in colData
deseq2
coldata
NA
updated 5.8 years ago by
Michael Love
42k • written 5.8 years ago by
t.kuilman
▴ 170
0
votes
3
replies
1.5k
views
How to create the colData for a complex experiment
multiassayexperiment
colData
updated 6.4 years ago by
Levi Waldron
★ 1.1k • written 6.4 years ago by
Lluís Revilla Sancho
▴ 730
9 results • Page
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Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
alex.pico
▴ 20
Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …
Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
by
bandconductor
• 0
thanks! you have saved me so much time
Comment: Problem finding certain variables when importing a public database GSE73103
by
Guido Hooiveld
★ 3.9k
FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…
Votes
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
A: DEXSeq time course design
using variable in design formula
differential expression for Single-cell RNAseq data using edgeR
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