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updated 4.3 years ago by
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written 4.3 years ago by
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Comment: cell_count column in SpatialExperiment Object
by
alan.ocallaghan
▴
120
Of the columns there, sum and total both refer to the total number of transcripts per observation (per spot, presumably, for Visium data). …
Comment: MA plot
by
Nathalie
•
0
Thank you again for your help. It's very nice of you to take the time to help a newbie. I downloaded your files, it will allow me to better…
Comment: MA plot
by
Guido Hooiveld
★
3.5k
Yes, some of the values in your input don't make sense.
Yet, since you just started learning below some code to use to read in a tab delim…
Comment: transcript name mapping between human and mouse
by
Eric
•
0
It works very well, and thanks for such a great answer! Because I use the old version gtf from GENECODE (vM12), the id version does not mat…
Comment: How to normalize long-read RNA-seq data for comparison with short-reads
by
Bernardo
•
0
Just did that, thank you for the suggestion.
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