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CopywriteR
•
reset
0
votes
2
replies
846
views
Error in if (nrow(peaks) > 0) { : argument is of length zero Calls: CopywriteR ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> Execution h…
CopywriteR
CopyhelpeR
20 months ago
fer_talavera
• 0
0
votes
1
reply
949
views
CopywriteR output
CopywriteR
updated 20 months ago by
fer_talavera
• 0 • written 4.1 years ago by
Joshua
• 0
2
votes
4
replies
1.4k
views
CopywriteR job runs out of memory
copywriter
cnv
updated 5.6 years ago by
oscarkrijgsman
▴ 20 • written 5.6 years ago by
Ram
▴ 220
0
votes
1
reply
1.4k
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 7.3 years ago by
t.kuilman
▴ 170 • written 7.3 years ago by
magdaaverte
• 0
3
votes
12
replies
3.0k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
TriS
▴ 200
1
vote
2
replies
2.2k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 8.5 years ago by
Martin Morgan
25k • written 8.5 years ago by
genomic8328
▴ 10
0
votes
1
reply
1.5k
views
Problems with CopywriteR
copywriter
updated 8.7 years ago by
t.kuilman
▴ 170 • written 8.8 years ago by
filipzembol
• 0
0
votes
1
reply
2.2k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 9.4 years ago by
t.kuilman
▴ 170 • written 9.4 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.9k
views
CopywriteR error: "Error in .Method"
CopywriteR
9.4 years ago
Tom
▴ 10
1
vote
3
replies
1.9k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 9.6 years ago by
t.kuilman
▴ 170 • written 9.6 years ago by
thestaroceanster
• 0
3
votes
3
replies
4.8k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
jcarter
• 0
2
votes
4
replies
3.0k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
jcarter
• 0
1
vote
2
replies
1.7k
views
Copywriter output looks strange
copywriter
9.8 years ago
MatthewGField
▴ 10
2
votes
9
replies
3.4k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.9 years ago by
smcnulty
• 0
0
votes
7
replies
2.7k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
smcnulty
• 0
0
votes
1
reply
1.8k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 9.8 years ago by
t.kuilman
▴ 170 • written 9.8 years ago by
sshung
• 0
2
votes
1
reply
1.7k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 10.0 years ago by
t.kuilman
▴ 170 • written 10.0 years ago by
Felix
• 0
17 results • Page
1 of 1
Recent ...
Replies
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
jtsy6383
• 0
Thanks for the reply Gordon. I am also working on the project and have been tasked to reformulate and add some details. We're interested i…
Answer: How does contrasts.fit do in limma to extract comparisons with a model having in
by
Gordon Smyth
53k
The limma Users Guide explains how to test for interactions or to test for contrasts very easily. limma can work with any design matrix, bu…
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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