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Showing :
CopywriteR
•
reset
0
votes
2
replies
350
views
Error in if (nrow(peaks) > 0) { : argument is of length zero Calls: CopywriteR ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> Execution h…
CopywriteR
CopyhelpeR
11 weeks ago • updated 10 weeks ago
fer_talavera
• 0
0
votes
1
reply
579
views
CopywriteR output
CopywriteR
updated 10 weeks ago by
fer_talavera
• 0 • written 2.6 years ago by
Joshua
• 0
2
votes
4
replies
938
views
CopywriteR job runs out of memory
copywriter
cnv
updated 4.1 years ago by
oscarkrijgsman
▴ 20 • written 4.1 years ago by
Ram
▴ 210
0
votes
1
reply
927
views
CopywriteR - low coverage-regions display very low numbers
copywriter
copynumber
updated 5.7 years ago by
t.kuilman
▴ 170 • written 5.7 years ago by
magdaaverte
• 0
3
votes
12
replies
2.1k
views
S4Vectors and subectHits error
s4vectors
copywriter
updated 6.2 years ago by
Michael Lawrence
★ 11k • written 6.2 years ago by
TriS
▴ 200
1
vote
2
replies
1.8k
views
BiocParallel and CopywriteR Error
bioconductor
biocparallel
copywriter
updated 7.0 years ago by
Martin Morgan
25k • written 7.0 years ago by
genomic8328
▴ 10
0
votes
1
reply
1.1k
views
Problems with CopywriteR
copywriter
updated 7.2 years ago by
t.kuilman
▴ 170 • written 7.2 years ago by
filipzembol
• 0
0
votes
1
reply
1.6k
views
CopywriteR: CNV calling on normals samples / gaps in chromosomes
copynumber
cnvtools
cnv
copywriteR
updated 7.9 years ago by
t.kuilman
▴ 170 • written 7.9 years ago by
ahinsahr11
• 0
0
votes
3
replies
1.4k
views
CopywriteR error: "Error in .Method"
CopywriteR
7.9 years ago
Tom
▴ 10
1
vote
3
replies
1.4k
views
CopywriteR can't finish calculating copy number
copywriter
bam
updated 8.1 years ago by
t.kuilman
▴ 170 • written 8.1 years ago by
thestaroceanster
• 0
3
votes
3
replies
3.9k
views
Preparing CopywriteR output for GISTIC 2.0 analysis
copywriter
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
jcarter
• 0
2
votes
4
replies
2.4k
views
Visualizing CopywriteR's segmentation output in IGV
copywriter
dnacopy
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
jcarter
• 0
1
vote
2
replies
1.3k
views
Copywriter output looks strange
copywriter
8.3 years ago
MatthewGField
▴ 10
2
votes
9
replies
2.5k
views
Calling amplifications and deletions from CopywriteR output
CopywriteR
copy number
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.4 years ago by
smcnulty
• 0
0
votes
7
replies
2.1k
views
Multithreading CopywriteR on SLURM cluster
copywriter
slurm
openMPI
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
smcnulty
• 0
0
votes
1
reply
1.4k
views
CopywriteR - choosing optimal bin size for targeted sequencing panel
copywriter
bin size
targeted sequencing
updated 8.3 years ago by
t.kuilman
▴ 170 • written 8.3 years ago by
sshung
• 0
2
votes
1
reply
1.3k
views
Copyhelper: Preprocession of mappability
CopywriteR
updated 8.5 years ago by
t.kuilman
▴ 170 • written 8.5 years ago by
Felix
• 0
17 results • Page
1 of 1
Recent ...
Replies
Answer: biomaRt has encountered an unknown server error while using getLDS
by
Mike Smith
★ 6.5k
There's a lot to unpack here! First, unfortunatley the getLDS funciontallity started failing with the release of BioMart 106. I've aske…
Comment: Most enriched pathway is not expressed when modifying universe parameter
by
adripel
• 0
Well, I was looking at the result table (enrich18k@result, or yy@result in your example), and it gives every pathway even the non-significa…
Comment: Trouble reading samplesheet in with diffbind to create dba
by
Mallory
• 0
Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …
Answer: Trouble reading samplesheet in with diffbind to create dba
by
Anthony
• 0
I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …
Comment: gds in GEOmetadb 2023-06-26 version is empty
by
Frederico Moraes Ferreira
▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Votes
Answer: biomaRt has encountered an unknown server error while using getLDS
A: limma: comparison of repeat measurements - blocking or within-subject correlatio
A: dream vignette says limma-voom repeated measures two-group comparison needs two
Answer: Get the latest gene name from Entrez ID
Get the latest gene name from Entrez ID
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★ 1.4k
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Jonathan
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