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RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor
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2.5 years ago
Maria Doyle
▴ 100
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News:
Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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2.5 years ago
Maria Doyle
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Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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Maria Doyle
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Translation Hackathon (community event) announcement
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3.4 years ago
kozo.nishida
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BioCAsia Virtual Meeting, 15-18 October 2020
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written 5.2 years ago by
Matthew Ritchie
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Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
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5.7 years ago
shepherl
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Bioc2020 - Deadline for workshops/talk/poster TOMORROW
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shepherl
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Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
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shepherl
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bioconductor
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shepherl
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shepherl
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shepherl
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2018 Toronto Bioconductor Conference registration details?
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updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
fannin
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12 results • Page
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Comment: Ensembl 115 has been released!
by
eja.gsssssswwse.r.m
• 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type
by
Kevin Blighe
★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction
by
Kevin Blighe
★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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