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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor Event Community Training
2.6 years ago Maria Doyle ▴ 110
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training Bioconductor Event Community Tutorial
2.6 years ago Maria Doyle ▴ 110
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training Bioconductor Event Community News
2.6 years ago Maria Doyle ▴ 110
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News: Translation Hackathon (community event) announcement
event translation community
3.4 years ago kozo.nishida • 0
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News: BioCAsia Virtual Meeting, 15-18 October 2020
news conference event News
written 5.2 years ago by ▴ 1000
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News: Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
conference bioc2020 event deadline News
5.8 years ago shepherl 4.2k
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News: Bioc2020 - Deadline for workshops/talk/poster TOMORROW
bioc2020 event conference bioconductor News
5.8 years ago shepherl 4.2k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
bioconductor conference event bioc2020 News
5.8 years ago shepherl 4.2k
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News: Bioc2020 - Deadline for workshops/talk/poster proposals in two weeks!
bioconductor bioc2020 event conference News
5.8 years ago shepherl 4.2k
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News: Bioc2020 - Registration - Call for abstracts for workshops/talks/poster - travel and caregiver scholarships
conference bioconductor event bioc2020 News
5.8 years ago shepherl 4.2k
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News: Bioc2020 - Registration Open - Call for abstracts workshops/talks/posters Open
bioconductor conference event News
5.8 years ago shepherl 4.2k
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2018 Toronto Bioconductor Conference registration details?
conference event
updated 8.0 years ago by 25k • written 8.0 years ago by • 0
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Comment: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR by efoss ▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma by Gordon Smyth 53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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Popular Question to jared.andrews07 ▴ 30
Popular Question to James W. MacDonald 68k
Popular Question to shepherl 4.2k
Popular Question to Gordon Smyth 53k
Popular Question to k___ ▴ 30
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