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News:
New Package Submission Deadline for Bioc Release 3.14
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3.7 years ago
shepherl
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Bioconductor 3.13 New Package Submission Deadline
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Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
Bioconductor
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4.1 years ago • updated 4.0 years ago
shepherl
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New Package Submission Deadline for Bioc Release 3.12
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4.6 years ago
shepherl
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News:
Bioc2020 - Call for BOF/HAK/FAQ Sections
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5.1 years ago • updated 4.9 years ago
shepherl
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News:
Import Deadlines for RELEASE 3.11
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bioconductor
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5.1 years ago
shepherl
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shepherl
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New Package and New Docker Image Submission Deadline for Bioc Release 3.11
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5.2 years ago • updated 5.1 years ago
shepherl
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News:
Bioconductor Release 3.10 Code Freeze Deadline
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News:
Important Deadlines for RELEASE
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updated 5.6 years ago by
Martin Morgan
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shepherl
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shepherl
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23 results • Page
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Recent ...
Replies
Comment: Check removeBatchEffect effectiveness
by
Gordon Smyth
52k
Both of your matrices, `design_batcheffects` and `design_timepoint`, span the intercept term, which will cause a warning about NA coefficie…
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
sloperun3az
• 0
Your essay was beneficial to me, and I found it to be very useful. Thank you for writing it. You give a wealth of knowledge that is not onl…
Comment: compute_fasta_digest does not match Salmon index hash
by
sloperun3az
• 0
The people who are reading your work are not taken into consideration, even though you appear to have a solid understanding of the subject …
Comment: parameters of filterByExpr
by
Paul Harrison
▴ 110
It might be worth trying limma-voom (or limma-trend) instead of a GLM based method. In our experience these are less prone to this problem.…
Comment: limma::voom vs edgeR::voomLmFit - when to use?
by
Gordon Smyth
52k
voomLmFit() is in edgeR instead of limma because it needs to call edgeR::glmFit() internally to determine which of the zero observations al…
Votes
Comment: Check removeBatchEffect effectiveness
Answer: Check removeBatchEffect effectiveness
A: what should I do with many zero counts from Salmon quantification
Comment: parameters of filterByExpr
GAlignments Cigar to GRanges
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