Bioconductor GSA

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747

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GSEA GSA vst

updated 22 months ago by Michael Love 42k • written 22 months ago by nhaus ▴ 70

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1.9k

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GSEA GSA

updated 6.1 years ago by Gordon Smyth 51k • written 6.1 years ago by Bogdan ▴ 670

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1.7k

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crlmm gsa microarray illumina

written 6.5 years ago by shaun • 0

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876

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GSA

6.7 years ago Seymoo • 0

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2.4k

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gsea concept gsa

updated 7.8 years ago by Pekka Kohonen ▴ 190 • written 7.8 years ago by Lluís Revilla Sancho ▴ 760

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1.6k

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GSA

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by epercamh • 0

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1.8k

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gsea gsa

updated 8.6 years ago by Axel Klenk ★ 1.0k • written 8.6 years ago by Bogdan ▴ 670

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1.9k

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limma GSA confounding within-pair analysis 450k

9.6 years ago • updated 9.5 years ago Aileen Bahl ▴ 10

8 results • Page 1 of 1

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Comment: DESeq Input from Salmon + tximport/tximeta by LuciaNhu • 0

Thank you both. Special thanks from Prof. Michael Love. It's rare to find tool authors who respond to users so quickly and supportively. Ma…

Comment: Question about using LRT test for time course experiments with DESeq2 by Denise • 0

Hi James, Yes, I understand that the p-values are with respect to the full versus reduced model comparison. However, the "genes that cha…

Comment: DESeq Input from Salmon + tximport/tximeta by Michael Love 42k

Agree. > for library size and the average transcript length, what additional components will dds <- DESeq(dds) continue to normalize? Will…

Comment: DESeq Input from Salmon + tximport/tximeta by ATpoint ★ 4.5k

> If I use gene_counts_length_scaled.tsv as a metric that has already normalized for library size and the average transcript length No, o…

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Gordon Smyth 51k

`nec` computes one set of negative control parameters (mu, sigma, alpha) for each sample. For values much larger than the background, the e…

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Comment: DESeq Input from Salmon + tximport/tximeta

Answer: DESeq Input from Salmon + tximport/tximeta

Answer: featureCounts segmentation fault with large chromosomes

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Popular Question to Assa Yeroslaviz ★ 1.5k