Bioconductor Goana

Showing : Goana • reset

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1.8k

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goana RNASeq edgeR RnaSeq GO

14 months ago Raito92 ▴ 60

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1.8k

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DESeq2 edgeR goana GO

updated 14 months ago by Gordon Smyth 47k • written 14 months ago by Raito92 ▴ 60

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565

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EdgeR Bioinformatics Goana

21 months ago Barista • 0

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1.3k

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go de enrichment rnaseq goana

updated 3.1 years ago by Gordon Smyth 47k • written 3.1 years ago by Raito92 ▴ 60

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843

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limma goana kegga

updated 3.7 years ago by Gordon Smyth 47k • written 3.7 years ago by Ahdee ▴ 50

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3.9k

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goana edger

updated 16 months ago by Gordon Smyth 47k • written 3.9 years ago by matrs ▴ 10

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1.0k

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limma goana edger

updated 4.9 years ago by Aaron Lun ★ 28k • written 4.9 years ago by b.nota ▴ 360

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2.1k

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edger goana kegga

updated 5.3 years ago by Gordon Smyth 47k • written 5.3 years ago by jfreixas • 0

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2.6k

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limma goana gene set enrichment

5.5 years ago emy_66 • 0

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3.9k

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edger goana gene ontology

5.6 years ago fawazfebin ▴ 60

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1.0k

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limma missMethyl gometh goana kegga

updated 5.9 years ago by Gordon Smyth 47k • written 6.0 years ago by Jenny Drnevich ★ 2.0k

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1.9k

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edger goana

updated 6.3 years ago by Gordon Smyth 47k • written 6.3 years ago by cronanz • 0

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1.5k

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goana limma

updated 6.5 years ago by Gordon Smyth 47k • written 6.5 years ago by mat149 ▴ 70

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1.0k

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edger goana

updated 6.7 years ago by James W. MacDonald 63k • written 6.7 years ago by jhj89 ▴ 10

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5.6k

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limma goana

updated 7.9 years ago by Gordon Smyth 47k • written 7.9 years ago by carl.mann ▴ 20

15 results • Page 1 of 1

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Comment: How to update a package at Bioconductor by ma79 • 0

thanks, just informed the original maintainer to send an email.

Comment: Error: biomaRt has encountered an unexpected server error. by Mike Smith ★ 6.0k

Unfortunately, the BioMart LDS functionality have been flaky for a while now e.g. https://support.bioconductor.org/p/9143401/ , https:/…

Comment: Use with_go along with other filters in getBM function by Mike Smith ★ 6.0k

Hi @rubbit0, I'm not sure I understand what you're trying to do. Do you have a long list of Ensembl Gene IDs and you're trying to select …

Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat by Anna ▴ 20

Dear Gordon, these are my metadata. As you see some subject are missing for timepoint 1 Subject Timepoint 1 ID1 Baselin…

Comment: Question on constructing design matrix and defining contrasts for analysis by mohammedtoufiq91 ▴ 10

Sure, noted.

Votes

Dispersion plot -Interpretation -DESeq2

Answer: Dispersion Estimates and MA plots

DESeq2: When to split multiple group samples for 'more' accurate sizefactors, dispersions etc.

WGCNA coupled with differential expression analysis: question about baseline module detection

WGCNA with paired samples

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