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Isoforms
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2
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2
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1.3k
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Confounding DE results with DESeq2
isoforms
DESeq2
3.9 years ago
arfranco
▴ 130
1
vote
9
replies
3.5k
views
Difference between gene-level test and transcript-level test with RATs (Relative Abundance of Transcrits)
RATs
RNA-Seq
Isoforms
DTU
expression
updated 6.6 years ago by
fruce_ki
▴ 20 • written 6.6 years ago by
UserAnonyme
• 0
0
votes
3
replies
2.2k
views
Downstream analysis for Salmon output: IsoformSwitchAnalyzeR or TSIS?
isoforms
diffrential expression
noncoding rna
TSIS
isoformswitchanalyzeR
7.7 years ago
rbenel
▴ 50
0
votes
0
replies
1.4k
views
Metadata sheet for DEXSeq analysis
dexseq
differential isoform usage
isoforms
summarizeoverlaps
granges
7.8 years ago
A
▴ 60
0
votes
0
replies
1.9k
views
cummeRbund heatmap for specific isoforms (not genes)
cummerbund
heatmap
isoforms
transcript_id
8.9 years ago
domenico.somma
• 0
5
votes
18
replies
4.7k
views
Incongruencies between DEXSeq and BitSeq/Cuffdiff
dexseq
bitseq
cuffdiff
Differential exon usage
isoforms
10.7 years ago • updated 10.6 years ago
elle
▴ 10
5
votes
3
replies
3.2k
views
edgeR: annotation and isoform analysis alternatives
edgeR
ruvseq
rnaseq
isoforms
10.7 years ago
sergio.espeso-gil
• 0
1
vote
2
replies
1.8k
views
DEXSeq transcripts per condition
DEXSeq
transcripts
isoforms
updated 10.7 years ago by
Alejandro Reyes
★ 1.9k • written 10.8 years ago by
peter_venhuizen
• 0
8 results • Page
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Answer: Species level information couldn't find with DADA2 bioconductor package
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Answer: Species level information couldn't find with DADA2 bioconductor package
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Answer: Species level information couldn't find with DADA2 bioconductor package
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Answer: Species level information couldn't find with DADA2 bioconductor package
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Answer: Species level information couldn't find with DADA2 bioconductor package
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Votes
A: DESeq2 - VST eliminates zero values
Comment: Normalise to a housekeeping gene in DESEq2
Comment: limpa analysis advice
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
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